G59987


Basic Information

Item Value
gene id G59987
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 54738727 ~ 54738954 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU66651
AAATAGTCCTAACAATTGTTTTATGTGTATATACTTGCAGACCTGTTTTAATTTGGTCGTTTATGGCCTCATTCTCCCCAAGATTATAATCCCAGGAAACATCTAAATTTGAGACTCCTAAACATCAATTTTCCCAGAAGAACACAACACGCCTAACTAGCATTCACTATGATTCCCCTTTAAGTCAAATCTTTAATCATAAGTTTTAAACAACGTCAATGTATATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66651 True 228 lncRNA 0.48 1 54738727 54738954

Neighbor

gene id symbol gene type direction distance location
adal adal coding upstream 274281 54445455 ~ 54464446 (+)
LOC110525380 LOC106573028 coding upstream 294195 54420422 ~ 54444532 (+)
LOC110525344 pta1 coding upstream 441441 54282939 ~ 54297286 (+)
LOC118964411 NA coding upstream 489515 54242821 ~ 54249212 (+)
LOC110525327 LOC106573036 coding upstream 648877 54044813 ~ 54089850 (+)
LOC110532453 reln coding downstream 487585 55226539 ~ 55523230 (+)
LOC110532459 NA coding downstream 823466 55562420 ~ 55671844 (+)
LOC110525494 LOC106573015 coding downstream 935132 55674086 ~ 55738417 (+)
LOC110525514 LOC106573043 coding downstream 1076417 55815371 ~ 55830186 (+)
LOC118964919 NA coding downstream 1237205 55976159 ~ 56024913 (+)
G59542 NA non-coding upstream 144493 54593231 ~ 54594234 (+)
G59525 NA non-coding upstream 167571 54570944 ~ 54571156 (+)
G59468 LOC100195798 non-coding upstream 205452 54518384 ~ 54533275 (+)
G59489 NA non-coding upstream 233290 54504700 ~ 54505437 (+)
G59459 NA non-coding upstream 279894 54457380 ~ 54458833 (+)
G60010 NA non-coding downstream 16263 54755217 ~ 54755442 (+)
G60067 NA non-coding downstream 64683 54803637 ~ 54803875 (+)
G60070 NA non-coding downstream 66171 54805125 ~ 54805415 (+)
G60075 NA non-coding downstream 68398 54807352 ~ 54807582 (+)
G60257 NA non-coding downstream 306233 55045187 ~ 55045920 (+)
G59963 NA other upstream 17264 54721188 ~ 54721463 (+)
G59031 NA other upstream 750130 53988140 ~ 53988597 (+)
LOC118936380 LOC106581842 other upstream 1067454 53632830 ~ 53705421 (+)
LOC110524575 fgf3 other upstream 3287792 51449353 ~ 51451460 (+)
G61202 LOC106573044 other downstream 1166554 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 1280522 56019476 ~ 56030371 (+)
G61804 NA other downstream 1507630 56246584 ~ 56247770 (+)
G61806 NA other downstream 1510934 56249888 ~ 56252015 (+)
G63958 NA other downstream 3427611 58166565 ~ 58168178 (+)

Expression


Co-expression Network