G61013


Basic Information

Item Value
gene id G61013
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 55534893 ~ 55535100 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU67730
tctctgtctctatctttctcccttaCTACCttgatctctgtctgtctgtctcgctctatgtctctctctccctcccctctctcttgttGTAGAGTTAGGCTACATACATTGATTGGCATCATTTACATGTCGATTCACAGGATATTAATACTATCAACATTGATGTGGATGTGGGACACTGTGATGGACTTCTAGTCCTACTCtagac

Function

NR:

description
PREDICTED: soluble scavenger receptor cysteine-rich domain-containing protein SSC5D-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67730 True 208 lncRNA 0.43 1 55534893 55535100

Neighbor

gene id symbol gene type direction distance location
LOC110532453 reln coding upstream 11669 55226539 ~ 55523230 (+)
adal adal coding upstream 1070447 54445455 ~ 54464446 (+)
LOC110525380 LOC106573028 coding upstream 1090361 54420422 ~ 54444532 (+)
LOC110525344 pta1 coding upstream 1237607 54282939 ~ 54297286 (+)
LOC118964411 NA coding upstream 1285681 54242821 ~ 54249212 (+)
LOC110532459 NA coding downstream 27320 55562420 ~ 55671844 (+)
LOC110525494 LOC106573015 coding downstream 138986 55674086 ~ 55738417 (+)
LOC110525514 LOC106573043 coding downstream 280271 55815371 ~ 55830186 (+)
LOC118964919 NA coding downstream 441059 55976159 ~ 56024913 (+)
LOC110525521 LOC106576899 coding downstream 1016648 56551748 ~ 56596653 (+)
G60638 NA non-coding upstream 322742 55211884 ~ 55212151 (+)
G60634 NA non-coding upstream 325220 55209318 ~ 55209673 (+)
G60631 NA non-coding upstream 328011 55206663 ~ 55206882 (+)
G60613 NA non-coding upstream 341288 55193258 ~ 55193605 (+)
G61033 NA non-coding downstream 11468 55546568 ~ 55559662 (+)
G61137 LOC106573040 non-coding downstream 210988 55746088 ~ 55750306 (+)
G61147 LOC106573040 non-coding downstream 226144 55761244 ~ 55767151 (+)
G61164 NA non-coding downstream 262173 55797273 ~ 55797489 (+)
G61168 LOC106573040 non-coding downstream 265450 55800550 ~ 55801438 (+)
G59963 NA other upstream 813430 54721188 ~ 54721463 (+)
LOC110525327 LOC106573036 other upstream 1472639 54044813 ~ 54089850 (+)
G59031 NA other upstream 1546296 53988140 ~ 53988597 (+)
LOC118936380 LOC106581842 other upstream 1863620 53632830 ~ 53705421 (+)
LOC110524575 fgf3 other upstream 4083958 51449353 ~ 51451460 (+)
G61202 LOC106573044 other downstream 370408 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 484376 56019476 ~ 56030371 (+)
G61804 NA other downstream 711484 56246584 ~ 56247770 (+)
G61806 NA other downstream 714788 56249888 ~ 56252015 (+)
G63958 NA other downstream 2631465 58166565 ~ 58168178 (+)

Expression


Co-expression Network