G61563


Basic Information

Item Value
gene id G61563
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 55832825 ~ 55833928 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU68326
tatggcatcctgtgggtgagcggtttgatGATTTCAACGTTGtgaagagtgccccatggtgcctgtgggattatggtatgggcagaaaTAAggtacggacaatgaacacaattgtattttatctaaagcaatttgaatgcatagagataccgtgatgaaATCCACGTGCCACTCATCCgctaccatcacctcatgtttcagcatgataatgcatggcccaatgtcgcaaggatctgtacacaaacATTTTCAAATTCTTcgatggcctgcatactcaccagacatgtcacccactgagcactcactgtttgggatgctctggatcgacgtgtatgacagcgtgttccagttccccccccaatatccatcaactttgcacagccattgaagatgaatgggacaacattccacaggccacaatcaacagcctgatcaactatccgaaggagatgtgttgcactgcaGGAGTATCTAGTTTTCTGATCCACCCCctactttttaaaaaatgtatctgttaccaacatatgcatatctgt
>TU68324
GTAAGATCCGTAGTAAATATTTTGTTTCCGCGAAGAGATAGTTTGAATAGCAGAAAAGTAGAGGAAGTCTCATACACTACACGTTTTTGTCAACATGTTGGGGTAGTGGTCAAAACGGTAGTTGTTTGCAAAAAAGTTTGAGAAAATGTTGATGAGGTAACTAAAACAGCTATAGTGTTAGAGATGGATATTTGGATATTTCTGTTATTATTTCAGATTTGAATTCCATAGCAGCAGACCGAGATGTAATACCCTCTAACTTTTTGTCTAAGTTGTTAGAAAAGTGGTCAAAGTAGATCATTTGTTTCAAAAGTTGTATTTTTGCATTGACAGTGAATggcagttggaagtgatgatgtcacaatggggagCTTTAGAATGTTGAGGAAAATGCCATGAAAGTGAATGAAGATCGATTATAATGtaaaaagtataaaatatataaaaaagtgGAACTTCTGACCAGTCTACACGTTTTAAAGTTAATGGCCACTGTCACACTGGAGAAGTAttctcttcacggattaatcccagtttcaactgtactgggcagatggcagacagcgtgtatggcatcctgtgggtgagcggtttgatGATTTCAACGTTGtgaagagtgccccatggtgcctgtgggattatggtatgggcagaaaTAAggtacggacaatgaacacaattgtattttatctaaagcaatttgaatgcatagagataccgtgatgaaATCCACGTGCCACTCATCCgctaccatcacctcatgtttcagcatgataatgcatggcccaatgtcgcaaggatctgtacacaaacATTTTCAAATTCTTcgatggcctgcatactcaccagacatgtcacccactgagcactcactgtttgggatgctctggatcgacgtgtatgacagcgtgttccagttccccccccaatatccatcaactttgcacagccattgaagatgaatgggacaacattccacaggccacaatcaacagcctgatcaactatccgaaggagatgtgttgcactgcaGGAGTATCTAGTTTTCTGATCCACC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68326 False 536 TUCP 0.45 1 55832825 55833360
TU68324 True 1057 lncRNA 0.41 1 55832872 55833928

Neighbor

gene id symbol gene type direction distance location
LOC110525505 LOC106573040 coding downstream 31833 55744407 ~ 55801039 (-)
LOC110525476 LOC106573024 coding downstream 704602 55071579 ~ 55128270 (-)
LOC118964914 NA coding downstream 798613 54978911 ~ 55034259 (-)
LOC110525471 NA coding downstream 866319 54963456 ~ 54966553 (-)
LOC110525462 LOC106561729 coding downstream 898228 54905357 ~ 54934644 (-)
LOC110525190 LOC106573044 coding upstream 67969 55901897 ~ 56147404 (-)
LOC110525232 NA coding upstream 235277 56069205 ~ 56079783 (-)
LOC110521481 LOC106573508 coding upstream 701741 56535669 ~ 56544298 (-)
smoc2 smoc2 coding upstream 957693 56791621 ~ 56873384 (-)
cdh23 cdh23 coding upstream 1070681 56904609 ~ 57560442 (-)
G61522 NA non-coding downstream 2683 55815406 ~ 55830189 (-)
G61556 NA non-coding downstream 20723 55811887 ~ 55812149 (-)
G61008 NA non-coding downstream 301600 55531070 ~ 55531272 (-)
G61006 NA non-coding downstream 302127 55530541 ~ 55530745 (-)
G61003 NA non-coding downstream 303326 55529329 ~ 55529546 (-)
G61564 NA non-coding upstream 2368 55836296 ~ 55836551 (-)
G61529 NA non-coding upstream 4825 55838753 ~ 55839809 (-)
G61530 NA non-coding upstream 6215 55840143 ~ 55840336 (-)
G61531 NA non-coding upstream 63813 55897741 ~ 55898159 (-)
G61635 NA non-coding upstream 199275 56033203 ~ 56087068 (-)
G60624 NA other downstream 629130 55203417 ~ 55203742 (-)
G60614 NA other downstream 639149 55193297 ~ 55193723 (-)
G60572 NA other downstream 678614 55150241 ~ 55154258 (-)
G60516 NA other downstream 761973 55070392 ~ 55070899 (-)
G59978 NA other downstream 1095628 54729131 ~ 54737244 (-)
G61715 NA other upstream 319502 56153430 ~ 56153918 (-)
G61978 NA other upstream 691042 56524970 ~ 56533975 (-)
G63093 NA other upstream 1201739 57035667 ~ 57062848 (-)
G63328 NA other upstream 1563266 57397194 ~ 57398488 (-)
G65147 NA other upstream 2950814 58784742 ~ 58785617 (-)

Expression


Co-expression Network