G62501


Basic Information

Item Value
gene id G62501
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 57016367 ~ 57016865 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU69378
caccgcctggtatggcaactgcaccgccctcaaccgtaaggctctccagagggtagtgaggtctgcacaacgcatcaccgggggcaaactacctgccctccaggacacctacaccacccgatgtcaaaggaaggccataaagatcatcaaggacatcaaccacccgagccactgcctgttcaccccgctatcatccagaaggcgaggtcagtacaggtgcatcaaagctgggaccgagagactgaaaaacagcttctatctcaaggccatcagactgttaaacagccaccactaacactgagtggctgctgccaacacactgacactgactcaactccagccactttaataatgggaattgataggaaatgatgtaaatatatcactagccactttaaacaatgctaccttatataatgttacttagcctacattattcatctcatatgcatacgtatatactgtactctatatcatcgactgtatccttatgtaatac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69378 True 499 lncRNA 0.47 1 57016367 57016865

Neighbor

gene id symbol gene type direction distance location
eif3s6ip LOC106576896 coding upstream 112141 56894252 ~ 56904226 (+)
LOC110525521 LOC106576899 coding upstream 419714 56551748 ~ 56596653 (+)
LOC118964919 NA coding upstream 991454 55976159 ~ 56024913 (+)
LOC110525514 LOC106573043 coding upstream 1186181 55815371 ~ 55830186 (+)
LOC110525494 LOC106573015 coding upstream 1277950 55674086 ~ 55738417 (+)
vsir cssa18h10orf54 coding downstream 18743 57035608 ~ 57062851 (+)
LOC110525562 LOC106576893 coding downstream 605402 57622267 ~ 57765398 (+)
LOC118964920 NA coding downstream 677633 57694498 ~ 57722025 (+)
wdr11 wdr11 coding downstream 789269 57806134 ~ 57940604 (+)
LOC110525578 NA coding downstream 944851 57961716 ~ 57963823 (+)
G62447 NA non-coding upstream 3635 56960399 ~ 57012732 (+)
G62415 NA non-coding upstream 104550 56911606 ~ 56911817 (+)
G62414 NA non-coding upstream 105992 56910168 ~ 56910375 (+)
G62406 NA non-coding upstream 127999 56888123 ~ 56888368 (+)
G62405 NA non-coding upstream 128913 56887194 ~ 56887454 (+)
G62504 NA non-coding downstream 2577 57019442 ~ 57019752 (+)
G62520 cdh23 non-coding downstream 50975 57067840 ~ 57068054 (+)
G62524 NA non-coding downstream 59803 57076668 ~ 57076895 (+)
G62565 NA non-coding downstream 119974 57136839 ~ 57137089 (+)
G62566 NA non-coding downstream 121132 57137997 ~ 57138199 (+)
G61806 NA other upstream 764352 56249888 ~ 56252015 (+)
G61804 NA other upstream 768597 56246584 ~ 56247770 (+)
G61284 LOC106573044 other upstream 985996 56019476 ~ 56030371 (+)
G61202 LOC106573044 other upstream 1092991 55905508 ~ 55923376 (+)
G59963 NA other upstream 2294904 54721188 ~ 54721463 (+)
G63958 NA other downstream 1149700 58166565 ~ 58168178 (+)
G63959 fgfr2 other downstream 1204657 58221522 ~ 58223130 (+)
G64292 NA other downstream 1569993 58586858 ~ 58587585 (+)
G64315 NA other downstream 1648469 58665334 ~ 58665906 (+)
G64338 NA other downstream 1682431 58699296 ~ 58700379 (+)

Expression


Co-expression Network