G62524


Basic Information

Item Value
gene id G62524
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 57076668 ~ 57076895 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU69402
aaaaaacttgtcaataatcaactgactggctttcttgatgtctacagtattctctctggtatgtaatctggtttccgctcaggttatggatgtctCACTGCaacctcaatgatgtcaccattgcccttgattctaagcaatgttgtgctgctatttttattgacttggccaaggcttttgatatggtagaccattccattcttatgggccggctaaggagtattggtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69402 True 228 lncRNA 0.55 1 57076668 57076895

Neighbor

gene id symbol gene type direction distance location
vsir cssa18h10orf54 coding upstream 13817 57035608 ~ 57062851 (+)
eif3s6ip LOC106576896 coding upstream 172442 56894252 ~ 56904226 (+)
LOC110525521 LOC106576899 coding upstream 480015 56551748 ~ 56596653 (+)
LOC118964919 NA coding upstream 1051755 55976159 ~ 56024913 (+)
LOC110525514 LOC106573043 coding upstream 1246482 55815371 ~ 55830186 (+)
LOC110525562 LOC106576893 coding downstream 545372 57622267 ~ 57765398 (+)
LOC118964920 NA coding downstream 617603 57694498 ~ 57722025 (+)
wdr11 wdr11 coding downstream 729239 57806134 ~ 57940604 (+)
LOC110525578 NA coding downstream 884821 57961716 ~ 57963823 (+)
fam160b1 fam160b1 coding downstream 1731475 58808370 ~ 58838199 (+)
G62520 cdh23 non-coding upstream 8614 57067840 ~ 57068054 (+)
G62504 NA non-coding upstream 56916 57019442 ~ 57019752 (+)
G62501 NA non-coding upstream 59803 57016367 ~ 57016865 (+)
G62447 NA non-coding upstream 63936 56960399 ~ 57012732 (+)
G62415 NA non-coding upstream 164851 56911606 ~ 56911817 (+)
G62565 NA non-coding downstream 59944 57136839 ~ 57137089 (+)
G62566 NA non-coding downstream 61102 57137997 ~ 57138199 (+)
G62571 NA non-coding downstream 70461 57147356 ~ 57147649 (+)
G62580 NA non-coding downstream 81646 57158541 ~ 57158781 (+)
G62591 NA non-coding downstream 96998 57173893 ~ 57174101 (+)
G61806 NA other upstream 824653 56249888 ~ 56252015 (+)
G61804 NA other upstream 828898 56246584 ~ 56247770 (+)
G61284 LOC106573044 other upstream 1046297 56019476 ~ 56030371 (+)
G61202 LOC106573044 other upstream 1153292 55905508 ~ 55923376 (+)
G59963 NA other upstream 2355205 54721188 ~ 54721463 (+)
G63958 NA other downstream 1089670 58166565 ~ 58168178 (+)
G63959 fgfr2 other downstream 1144627 58221522 ~ 58223130 (+)
G64292 NA other downstream 1509963 58586858 ~ 58587585 (+)
G64315 NA other downstream 1588439 58665334 ~ 58665906 (+)
G64338 NA other downstream 1622401 58699296 ~ 58700379 (+)

Expression


Co-expression Network