G64116


Basic Information

Item Value
gene id G64116
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 58347378 ~ 58351733 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU71058
GTGACAGACAAACAagcatacagcacacacacacacaaatgtttgCGTCACAGGAATACAACCAGATCATGTTTATTTCAGTGTGGTTTGTGGATGTGGCGTGTATGAGCCCAATCCTCAGAGTGAAGCAGCAACTTTCAGATTCTCCTCAACTtcactgattctagatcagtaaATAGTCTGATCCCATATCAGTACAGAGGAGAACCATGACTTGTGCTGGGTTAGGGTGAAGATGATGGCTACTGCTGCTTTCCGTGGGGTGAAAGTCAAACATTATGAAATCAAAATTACACTGACATTAATGTTCCCAGTAACCAATATTTCTGAGTCTTAATCAACTGGATTGATAGTTGTGAACTAAATAGACAACATACTTTGTTAAACTGAAACCTTGCGTATTATGGATAAAACTGACATCTACCAAACGTGATTCAGATATAATATCATAGACGAGGCCGCCAGGTGAGTGCAatatgccttcagaaagcattcatacttttagatttatttcacattttattGCGTTACAGctggaattcaaaatggattaaatatgtttccctctcatccatccatctctcaacccataacgacaaagtataaacatgtttttagacatttttgcaaatgtagtgaaaatgaaacacagaaatgtctaatttacgtaagtattcacacccgagtcaatacatgttatgaATCATCCTTGGCAACTATTAAggctgtgagtatttctgggtaagtctaagagctttgcacactggattgtacaatatttgcatattatttttcaaattcttcaagctctgtcaagttggttgttgatcattgctagacagccgttttcaagacaatttaagtcaaaactgtaactaagccaCTCAGAAATATTCAATGTAGTCTTGGTAAGCACCTCCAGTGTATGTTTGACCTTGTGTTTAATGTTTaatattcggagcatgtgactaatacaatttgatttgatattgtcctgctgaaaggtgagtgtctcccagtgtctgttgaaaagcacaataaaccaggttttcctctaggattttgcctgtgcttagctctattccatttatttttttatcccccCTCAAaaaatccctagtccttgccgatgacaagcatacccataacatgatgcagccaccaccatgcttggaaATATGAAGTGGTAattagtgatgtgttgtgttggatttgttcCAAACATGACACTTCGTActcaggacataaagtacatttctgtgccacattctttgcagttttactttagtgccttatcgcaaacatgcatgttttggaatatttttattctgtacaggcttccttcatttaggttagtattgtgcagAAACTACGttgctgatccatcctcagtctTCTATCACAGGTCTTTAAAACAAGTAGTTTAAGTCACCATTCgccttatggtgaaatccctgagtggtttctttcctttccggcaactaagttaggaaggaggcctgtatatttgtgtgtattgatacaccatccaaagtgtaattaataatttcaccatgtttaaagggatattcaatatctggtttctctcccccccccccccatctaccaataggtgctctttgcgaggcattggaaaacctccctggtctttgcggTTGaaactgtgtttgaaattcactgctcgactgctcgagggaccttacagataattaattgtatgtgttaatttgtcctatttagctagcttgctgttgctagctaatttgtcatgggatataaacattgagttgttattttacctgaaatgcacaaggacctctactccgacaattaatccacacataaaacggccaaccaaattgtttctagtcatctctcctccttccaggctttttcatctttgaacttatatggtgatcactttcatagtattaccacgacaaccggaaACAAAGTTgctctttcaatcacccacgtgggaataaccaatgaggaaatgggagaggcaggactttcagcgcgatctgcgtcagaaatagaaagttatattttagcccttggcatcgcagacaCTCTTTGGCGcgcgcaagcagtgtgggtgcaataattgaataacacaaatttcaaaatgtattttgcgacgctcgcgcacccgacgtgtctggtctggtcagcatgttagtcgatcaccaaacatttctgtagaagCCAACGATAAAGTCAGAggcatgtgttttttttttgttttgtgctGTTGGCGGTAGATGCCTCTTTTTTTCAGAAGTCCTTGCGCACCAGGTAGGCAAAATGTATCCATTTGGAATCATTGAATTTGTCTGAAAAGACAAACTTTGCCTACCCGGCAGACATGGAGATCTGTGGCTAAAACGAGTGTGCATActgcgctggccaatcagatagctcaaaTCACTGTGCCTACCTACAGCTTCCACGACCCCAACCACAGCAAAGATTGATACTAGCTTAGGTAAGATGTTATAACTTTTAAAACCATTACCATTAGAGATACTGTCAAATAATACAGCAaatagctgctgtttttatgagtgagttcatgtcgaagttttattcagcactgtcaacactgttttaattcaacactattacaaaacaTAAAGCACTTCTCTCTACTTCCACTCGCACTGCAGCTGCATTGAATGAGTAGTCAAGTGTATCGATAGCCCTGCGTTTTATAATTATTAGCAGCTCGTTGTCCATTTCAATATCGCAGAGTATTTAACTTTTTCTGGAATTTGAATTTGTGCCCGAGGCACAATCAagtggaagactgtgtcccctctAAATGGTCAGTCACATCGGAGGAACGCAAAGAAAGAGGGACCGTGAGAGGCGGACCCTCTGCTgctatctccctccctccgctgagactgataCCATGTTCAAGACAATTGGGAACTcctaaaaaaaacaacacagctggagtcattaaaactcgttttttcaaccactccacacatttcttgttaacaaactatagttttggcaagtcggttaggccaTGTACTTTGTAATCTacaagcaatttttccaacaattgtttacagacagattatttcactgtatcacaattccagtgggtcagacatttacatacactaagttgactgtgcctttaaacagcttggaaaattccagaaaattatgtaatggctttagaagcttctgataggccaattgacatcatttgagtcaattgtacctgtggatgtatttcaaggcctaccttcaaactcagtgcctctttacttgacattgggaaaataaaaataaatcacaactccacaagtctggttcatccttgggagcaatttctaaacgcttgaaggtaccacgttcatctgtacaaacaatagtacgcagcagtcataccgctcaggaaggagacaacgttctgtctcctagagatgaacgtactttggtgcgaaaagtgaaaatcaatccaagaacagcaaaggaccttgtgaatatgctggaggaaacagctacaaaagtatctatatccacagtaaaacgagccctatatcaacataacctgaaaggccattcagcaaggaagaagtcactgctccaaaactgccataaaaaaagccagactacagtttgcaactgcacatcgtactttttggggaaatgtcctctagtctgatgaaacaaaaatagaactgtttggccataattaccatcgtttggaggaaaaaggcgggatgcttgcaagccgaagaacaccatcccaaccgtgaagcacggagtggcagcatcatgttgtgggggtgctttgctgcaggagggactggtggtcttcacaaaatagatggcatcatgaggatggaaaattatgtggctatattgaagcaacatctcaagacaacactcaggaagttaaagcttggtcgcaaatggttcttccaaatgaataatgaccccaagcatacttccaaagttgtggcaaaatggcttaaggacaacaaagtcaaggtattggagtggcagaactgaaaaaagagtgcgcgagcaaggaggcttacgaACCTtacccagttacaccagctctgtcaggaggaatgggccaaaagcttgtggaagactacccgaaacatttgacccaagttaaacaatttaaaggcaatgctaccaaatactaattgagcgtatgtaaacttctgacccactgggaatgtgatgaaggaaataaaagctgaaataaaatcactactattattctgacattttacattcataaaataaaagtggtgatcctaactgatctaagacatgGAAAttttactaggtttaaatgtcaggaattgtgaaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71058 True 4356 lncRNA 0.43 1 58347378 58351733

Neighbor

gene id symbol gene type direction distance location
LOC110525578 NA coding upstream 383555 57961716 ~ 57963823 (+)
wdr11 wdr11 coding upstream 409390 57806134 ~ 57940604 (+)
LOC110525562 LOC106576893 coding upstream 581980 57622267 ~ 57765398 (+)
LOC118964920 NA coding upstream 625353 57694498 ~ 57722025 (+)
vsir cssa18h10orf54 coding upstream 1284527 57035608 ~ 57062851 (+)
fam160b1 fam160b1 coding downstream 456637 58808370 ~ 58838199 (+)
trnaa-ugc NA coding downstream 710074 59061807 ~ 59061880 (+)
LOC110525756 NA coding downstream 858273 59210006 ~ 59212175 (+)
erlin1 LOC106576878 coding downstream 932591 59284324 ~ 59299682 (+)
si:ch211-217g15.3 LOC106576876 coding downstream 988806 59340539 ~ 59342276 (+)
G64115 NA non-coding upstream 1227 58345845 ~ 58346151 (+)
G64112 NA non-coding upstream 3874 58343150 ~ 58343504 (+)
G64111 NA non-coding upstream 5828 58341238 ~ 58341550 (+)
G64108 NA non-coding upstream 9130 58338010 ~ 58338248 (+)
G64103 NA non-coding upstream 15335 58331839 ~ 58332043 (+)
G64257 NA non-coding downstream 182796 58534529 ~ 58539060 (+)
G64262 NA non-coding downstream 190146 58541879 ~ 58542134 (+)
G64264 NA non-coding downstream 190865 58542598 ~ 58542859 (+)
G64250 NA non-coding downstream 201945 58553678 ~ 58553903 (+)
G64269 NA non-coding downstream 202479 58554212 ~ 58554570 (+)
G63959 fgfr2 other upstream 124248 58221522 ~ 58223130 (+)
G63958 NA other upstream 179200 58166565 ~ 58168178 (+)
G61806 NA other upstream 2095363 56249888 ~ 56252015 (+)
G61804 NA other upstream 2099608 56246584 ~ 56247770 (+)
G61284 LOC106573044 other upstream 2317007 56019476 ~ 56030371 (+)
G64292 NA other downstream 235125 58586858 ~ 58587585 (+)
G64315 NA other downstream 313601 58665334 ~ 58665906 (+)
G64338 NA other downstream 347563 58699296 ~ 58700379 (+)
G65442 NA other downstream 972903 59324636 ~ 59325129 (+)
G66188 NA other downstream 1589753 59941486 ~ 59942064 (+)

Expression


Co-expression Network