G67870


Basic Information

Item Value
gene id G67870
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 61541521 ~ 61544200 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU75120
attgttgcatttttatatttttgttcagtatagaatgcATATCAACGTTGCCCCCCTTTCAACCTCCAAGTGCCCATATATCTGATGTTTTAACAATCATTTTCTAACAAGGCAAAATAAGCGTTCCAAGAATATGAAGATTAAAATAGCCTGTTTGAGACGATTCAAATTGACAGTATTTTAATGTTAATCTACATATTAATCAGCTGAAATGCACACATTGTTCAGGGTAGAGGGTGAGTTAATGAGGCAGGTTATCCTGGTCCAGTGGCAAGGAGCTTGGTGGCTGTTTCAGTGGGGCAGCTCATGACGGACAAACTGATAGTGGGACCCACATTCGGGACAGCGCTGGGGCTTCCCCTCATGGAGCCAAAACCACACAATGGCAGTGTTGTCCTCTTCACCTATGGTACATAATCACAAGTGTTGGCACATTTTTATATTCTTTTGAGAACATTTTAAAGCATGAAAGTATGGTACTTACACAGACAGCCTACCAGCCGTTTGTCACTAATGCCTGGGACAATGTGAGGGTCTTCTTTGGTTCCAGCATACTCCTTGGGTTTCAGAATGCTCCAAGGATCCTgcatttttttttcaaaaaaaaaGTACTTGTATGAACACAAATCAATCTTATTTGAATTGAAGCAGACATCAATAGGTTGAAACAAATAtacagtgcaatcggaaagtattcagaccccattactttttccacatttatgttacagccttaatctacacacaataccctatactGACAAGGTGataacaggtttagacatttttgctaatttattaaaaacataAAACATAACTTGTATGTAtgattgagctcaggtgcatcctgtttccattgatcatccttgatgtttctacaacttgattagagtcctcctgtggtaaattcaattgattggacatgatttggaaaggcacacctatctatttaaggtcccacagttaacagtgcatgtcagtgctAAAAACAAAGCCACAAGGTCAAAGGAAATGTCCGTAGTcctccgagacaggattctgttgaggcacagatctggggaagggtaccaaaaaatgtctgcagcatggaagacgtttggaacaacgaagactcttcctagagctggccgcccagccaaactgagcaatcaggggaaaagggccttggtcagggaggtgaccaagaacccgatggtcaatctgacagagctccagagttcctctgtggaattGGGAGAACCTCCCCGAAGGACCACCACCtcaacagcacttcaccaatcaggcttttatggtagtgtccagatggaagccattcctcagtaaaaggcacctaaaggactctgaccatgagaaaccagattctctggtctgatgaaaccaagattgaactctttggcctgaatgtcaagcatcacctctggaggaaacctggcaccatcgctacggcgaagcatggtggtggcagcatcatgctgtagggatgtttttccgcggcagggactgtgagactagtcaggatcaaggcaaagatgaacggagcaaagtacagagagatcattgataaaaacctgctccagagagctcaggacctcagactggggcgaaggttcaccttccaacaggacaacggccctaagcacacagccaagacaatgcaggagtggcttcgggacaagtctgaatgtccttgagtggccaagcgaGAGCCAGGacttggtaatccatttaagaataaggctgtaacataacaaaatgtgaaatagtcaaggggtctgaatcctttccaaatgcactgtatgctaGATATGACCTTTCCTTTCTTCAGTGCCTGCAAGGCACGTCGCTCGAGTCCAGTAGCCTGTTCCTCATCGGTTGGAATCCCTGGAAGGAGACCGTTAGTGTGACACCTGTGACTTTATACACTACTTGACATTCAAATTAAGGGCATAATGTTTATCAGAACAAGAAAATCATGTTACCTCTTAACAGAGTGCATGTAATAGTTATGAGTCAAACGGCACGTCCACAAGCACACACAACTCATGTCCTCCATGTTAAGATATACCTGGCACCAAATCAACGAATGTCTGCCAAAGAAGGTGGGTCTATCAATGGGCCTTCCAGTGGTTAAAATCCAAATGACCTTCAGTTATTTACAAATGTAGTAGGTTTCGTGTTTCTAAATACAGTAACATCCTTTTACAATTAATAACACTGTCAAATTGGTAGTTATTTTATGAATGCGTCATGCACGTGTATTCCGTGATTTGGTATTCTATTTTTACAAATGTGGTGCCTAGGCGAAGTGTTGCCTTGTAGGATATACTTGCAGAGCAGTCATAATATTGTTTATTCTATCATGTCAAATACTTCAAAACAGATTAGTTATTCGATTTGATGGACATTCCGACGGACCACAACCGATTAAATGTATATTACACACACAAATTAAATTTACGCACACACGTACCTTTTAATGTGGTCATAGTGCGTGGCAGTGATCTTGCCACAACATTGTTTCTTGCCAATTGCAAGGTTGTACAGGTACGGAGTAAAAACCTGCCTGCCATAATGAATTCACTTTCGCTTAAACTACCGCGTGTGATCTGAACAATCTGCTGGACTGAAATGACCCCATTTATTTCCAACCTTGacttga
>TU75122
TATTTTAATGTTAATCTACATATTAATCAGCTGAAATGCACACATTGTTCAGGGTAGAGGGTGAGTTAATGAGGCAGGTTATCCTGGTCCAGTGGCAAGGAGCTTGGTGGCTGTTTCAGTGGGGCAGCTCATGACGGACAAACTGATAGTGGGACCCACATTCGGGACAGCGCTGGGGCTTCCCCTCATGGAGCCAAAACCACACAATGGCAGTGTTGTCCTCTTCACCTATGGTACATAATCACAAGTGTTGGCACATTTTTATATTCTTTTGAGAACATTTTAAAGCATGAAAGTATGGTACTTACACAGACAGCCTACCAGCCGTTTGTCACTAATGCCTGGGACAATGTGAGGGTCTTCTTTGGTTCCAGCATACTCCTTGGGTTTCAGAATGCTCCAAGGATCCTTTCTTCAGTGCCTGCAAGGCACGTCGCTCGAGTCCAGTAGCCTGTTCCTCATCGGTTGGAATCCCTGGAAGGAGACCTTTTAATGTGGTCATAGTGCGTGGCAGTGATCTTGCCACAACATTGTTTCTTGCCAATTGCAAGGTTGTACAGGTACGGAGTAAAAACCTGCCTGCCATAATGAATTCACTTTCGCTTAAACTACCGCGTGTGATCTGAACAATCTGCTGGACTGAAATGACCCCATTTATTTCCAACCTTGacttga

Function

NR:

description
cytochrome c oxidase subunit 5B, mitochondrial-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU75120 False 2659 lncRNA 0.42 2 61541521 61544200
TU75122 True 675 lncRNA 0.46 3 61541697 61544200

Neighbor

gene id symbol gene type direction distance location
herc4 herc4 coding upstream 584 61517953 ~ 61540937 (+)
LOC110526212 LOC106576837 coding upstream 36216 61501014 ~ 61505305 (+)
LOC110526206 fam83h coding upstream 53094 61437607 ~ 61488427 (+)
lrrfip2 lrrfip2 coding upstream 139714 61342105 ~ 61401807 (+)
LOC110526122 LOC106576844 coding upstream 314396 61117250 ~ 61227125 (+)
LOC110526236 sirt1 coding downstream 4981 61549181 ~ 61561338 (+)
LOC110526250 LOC106576834 coding downstream 17412 61561612 ~ 61571769 (+)
mypn mypn coding downstream 28601 61572801 ~ 61623278 (+)
atoh7 atoh7 coding downstream 85725 61629925 ~ 61631527 (+)
pkd2l1 pkd2l1 coding downstream 90963 61635163 ~ 61646181 (+)
G67897 NA non-coding upstream 29686 61511635 ~ 61511835 (+)
G67856 NA non-coding upstream 112957 61423275 ~ 61428564 (+)
G67855 NA non-coding upstream 123794 61417130 ~ 61417727 (+)
G67847 mlh1 non-coding upstream 130905 61409429 ~ 61410616 (+)
G67818 NA non-coding upstream 138171 61365662 ~ 61403350 (+)
G67921 NA non-coding downstream 40264 61584464 ~ 61584663 (+)
G67938 NA non-coding downstream 49377 61593577 ~ 61593781 (+)
G67939 NA non-coding downstream 49694 61593894 ~ 61594121 (+)
G67950 NA non-coding downstream 71193 61615393 ~ 61615668 (+)
G67806 LOC106581772 other upstream 226269 61314874 ~ 61315252 (+)
G66188 NA other upstream 1599457 59941486 ~ 59942064 (+)
G65442 NA other upstream 2216392 59324636 ~ 59325129 (+)
G64338 NA other upstream 2841142 58699296 ~ 58700379 (+)
G64315 NA other upstream 2875615 58665334 ~ 58665906 (+)
G67930 mcmbp other downstream 185565 61729765 ~ 61733388 (+)
G70011 NA other downstream 1730763 63274963 ~ 63275296 (+)
LOC110526969 stk32c other downstream 3265389 64809255 ~ 64946164 (+)
LOC110527164 LOC106576754 other downstream 4371535 65915581 ~ 65922285 (+)
G73515 NA other downstream 4743479 66287679 ~ 66288469 (+)

Expression


Co-expression Network