Gene
RNA
| Item | Value |
|---|---|
| gene id | G76500 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 68939536 ~ 68939755 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU84570 | True | 220 | lncRNA | 0.40 | 1 | 68939536 | 68939755 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528072 | NA | coding | downstream | 16230 | 68909178 ~ 68923306 (-) |
| LOC110528038 | LOC106576680 | coding | downstream | 90867 | 68769225 ~ 68848669 (-) |
| LOC118964446 | NA | coding | downstream | 197465 | 68705693 ~ 68742071 (-) |
| LOC110527951 | coda1 | coding | downstream | 249193 | 68575379 ~ 68690343 (-) |
| LOC110527939 | LOC106576682 | coding | downstream | 364414 | 68555998 ~ 68575122 (-) |
| LOC110528078 | LOC106606490 | coding | upstream | 1817 | 68941572 ~ 68989407 (-) |
| shtn1 | shtn1 | coding | upstream | 107190 | 69046945 ~ 69095234 (-) |
| atp6v1ba | LOC100136607 | coding | upstream | 157126 | 69096881 ~ 69141094 (-) |
| vax1 | LOC106576936 | coding | upstream | 229765 | 69169520 ~ 69179563 (-) |
| LOC110528163 | LOC106576940 | coding | upstream | 348698 | 69288453 ~ 69363097 (-) |
| G76499 | NA | non-coding | downstream | 1454 | 68931237 ~ 68938082 (-) |
| G76492 | NA | non-coding | downstream | 38658 | 68900628 ~ 68900878 (-) |
| G76491 | NA | non-coding | downstream | 39620 | 68899654 ~ 68899916 (-) |
| G76369 | NA | non-coding | downstream | 211984 | 68727268 ~ 68727552 (-) |
| G77235 | NA | non-coding | upstream | 363997 | 69303752 ~ 69304024 (-) |
| G77276 | LOC106581475 | non-coding | upstream | 424476 | 69364231 ~ 69364549 (-) |
| G77277 | NA | non-coding | upstream | 425856 | 69365611 ~ 69366130 (-) |
| G77279 | NA | non-coding | upstream | 429517 | 69369272 ~ 69369557 (-) |
| G75682 | NA | other | downstream | 727830 | 68210180 ~ 68211706 (-) |
| sdhaf4 | LOC106576700 | other | downstream | 777534 | 68157900 ~ 68162024 (-) |
| LOC110527687 | sncg | other | downstream | 1257806 | 67669589 ~ 67681775 (-) |
| LOC110527584 | LOC106576720 | other | downstream | 1551492 | 67386509 ~ 67389299 (-) |
| LOC118965321 | LOC106576963 | other | upstream | 1143085 | 70082835 ~ 70088715 (-) |
| G78414 | NA | other | upstream | 1415161 | 70354916 ~ 70355591 (-) |
| G79616 | NA | other | upstream | 2382195 | 71321950 ~ 71386523 (-) |
| G79700 | NA | other | upstream | 2529927 | 71469435 ~ 71470755 (-) |
| G79904 | NA | other | upstream | 2803290 | 71743045 ~ 71743809 (-) |
