XLOC_020361 (si:dkey-21e2.10)


Basic Information

Item Value
gene id XLOC_020361
gene name si:dkey-21e2.10
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 19247255 ~ 19250734 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040421
TCGTCTTCATCATGACCATCATCTCTCTGCTCCTGCTGGTTTCACTGGTGCCACACCTGACCTTCACTGCTCGTGTAGGTATACAGGACGGCACTGAAGCAAAACCTCACTCCAGACCTTACATGGTTTCTCTTCAATTTTATAAGCTGCATATGTGTGGTGGATCCCTCATTACTGAAGAGTTTGTCTTGACTGCTGCACATTGCTGGGAAGAAGATGATGTCCTCACGGTTGTGACTGGTGCTCATGATTTGCGTAAAAAAGCAATTAACAACGTCTATAAAGTGAAATCCTACATCCCGCATCCAGACTTTAATTCTAAAACTCTTGAGAATGACATCATGCTTTTGCAGCTAAAGACAAAAGTCAGACTGAGCAACAATGTTGGACTGATATCATTACCAAAGGATGGAGAAGATGTTAAAGCAGATACTCTCTGTAGTGTTGCTGGCTGGGGGGATCTGTGGAGTAAAGGCCCAGAGACTGATCGTCTAAGAGAGGCAGAGACAGTTATAGTGAATAATGCAGAGTGTGAACGCAGATGGGAATCTGATTATGTGGCCTCTAAGATGATCTGTGTTTATGGTCATGGTGGAACCTGCAGTGGTGATTCAGGAGGTCCTTTGGTTTGTGGAGACACTGTTGTTGGTATCACTTCTTTTGGTGAACCTTATCTCTGCAATTCACGTTTGTTTCCTGATGTGCATACTAGGATTTCAGCATATCTTCCATGGATCCACAACATAACTGGAAAGGTTTAGTGGCTTCATGAAAAGAAGAAATGTTTTTCTTGGAATCTTCCGAAAATCATTCAATAAAACTATCAAATGGCAAGCATC

Function

symbol description
si:dkey-21e2.10 Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis.

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004252 serine-type endopeptidase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008236 serine-type peptidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050208-778 Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis.

Ensembl:

ensembl_id ENSDARG00000095005

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040421 True 839 mRNA 0.43 5 19247255 19250734

Neighbor

gene id symbol gene type direction distance location
XLOC_020360 BX927243.1 coding upstream 9029 19237031 ~ 19238226 (+)
XLOC_020359 si:dkey-21e2.7 coding upstream 13336 19218733 ~ 19233919 (+)
XLOC_020357 si:dkey-21e2.3 coding upstream 63749 19175651 ~ 19183506 (+)
XLOC_020356 fgf22 coding upstream 90923 19111444 ~ 19156332 (+)
XLOC_020355 hcn2b coding upstream 239287 18951096 ~ 19007968 (+)
XLOC_020362 si:dkey-78l4.5 coding downstream 13447 19264181 ~ 19428807 (+)
XLOC_020363 si:dkey-21e2.13 coding downstream 26627 19277361 ~ 19279253 (+)
XLOC_020364 si:dkey-21e2.14 coding downstream 33244 19283978 ~ 19285300 (+)
XLOC_020365 si:dkey-21e2.15 coding downstream 39236 19289970 ~ 19291261 (+)
XLOC_020366 si:dkey-21e2.16 coding downstream 60677 19311411 ~ 19313738 (+)
XLOC_020351 NA non-coding upstream 650997 18560343 ~ 18596258 (+)
XLOC_020344 NA non-coding upstream 942967 18243758 ~ 18304288 (+)
XLOC_020345 NA non-coding upstream 955458 18291474 ~ 18291797 (+)
XLOC_020339 BX908731.2 non-coding upstream 1422682 17824459 ~ 17824573 (+)
XLOC_020380 BX510913.2 non-coding downstream 520964 19771698 ~ 19771812 (+)
XLOC_020381 BX510913.3 non-coding downstream 542385 19793119 ~ 19793233 (+)
XLOC_020382 NA non-coding downstream 588541 19839275 ~ 19839592 (+)
XLOC_020383 NA non-coding downstream 761062 20011796 ~ 20050276 (+)
XLOC_020385 BX005203.1 non-coding downstream 888791 20139525 ~ 20139592 (+)

Expression


Co-expression Network