G93344 (LOC106577192)


Basic Information

Item Value
gene id G93344
gene name LOC106577192
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 83338930 ~ 83339181 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU102799
CTCATGGACGTAGAGCAATGTTGTTGGTAGTGTATGGCCTTGTCTCGTTGTTTCAGCAACGTGTCCATCTGTTTCTGTAGTCGTCGGTTCTCTTCCTCCGCCTGCTCCAACCTGCTCAGGTCCGTGTTGTGATTGGCAACTTTCTCACCGTAGCGTTTGCTCAGCGAATCGTATTCCTTCCTCACCCCCTCCAGCTTGTCCATGGCTGTGTCGTACAGTTTGTTGAGAACCTCTGAGGAACCGTTCTCTCTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102799 True 252 lncRNA 0.52 1 83338930 83339181

Neighbor

gene id symbol gene type direction distance location
LOC110530624 cssa18h10orf11 coding upstream 422519 82456299 ~ 82916411 (+)
LOC110530588 LOC106577200 coding upstream 1159853 82172076 ~ 82179077 (+)
LOC110530572 LOC106577202 coding upstream 1190081 82128619 ~ 82163498 (+)
LOC110530536 LOC106577203 coding upstream 1335277 81910118 ~ 82005198 (+)
LOC110530526 LOC106577204 coding upstream 1431531 81906132 ~ 81907399 (+)
LOC110530670 NA coding downstream 68470 83407651 ~ 83442131 (+)
LOC110530741 LOC106577189 coding downstream 113067 83452248 ~ 83484011 (+)
LOC110530763 LOC106577187 coding downstream 171936 83511117 ~ 83667671 (+)
LOC110530841 LOC106613168 coding downstream 382678 83721859 ~ 83798056 (+)
LOC110530850 LOC106577251 coding downstream 459250 83798431 ~ 83817516 (+)
G93363 NA non-coding upstream 4830 83333792 ~ 83334100 (+)
G93347 NA non-coding upstream 9097 83329592 ~ 83329833 (+)
G93346 NA non-coding upstream 9573 83329145 ~ 83329357 (+)
G93343 NA non-coding upstream 13634 83325026 ~ 83325296 (+)
G93342 LOC106577192 non-coding upstream 14083 83324603 ~ 83324847 (+)
G93365 NA non-coding downstream 2840 83342021 ~ 83342311 (+)
G93367 NA non-coding downstream 7249 83346430 ~ 83347033 (+)
G93379 LOC106577192 non-coding downstream 34641 83373822 ~ 83374559 (+)
G93384 NA non-coding downstream 42682 83381863 ~ 83382069 (+)
G93388 NA non-coding downstream 46981 83386162 ~ 83386371 (+)
G93362 NA other upstream 5354 83333266 ~ 83333576 (+)
G93204 NA other upstream 248998 83088531 ~ 83089932 (+)
G92575 trmt13 other upstream 1157134 82180946 ~ 82181796 (+)
G94463 NA other downstream 706130 84045311 ~ 84048149 (+)
LOC110532822 LOC106577256 other downstream 1043576 84373236 ~ 84410052 (+)
G95702 NA other downstream 1800959 85140140 ~ 85141006 (+)

Expression


Co-expression Network