G100993


Basic Information

Item Value
gene id G100993
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 91761468 ~ 91761831 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU112413
tacctgctctaaccactaggctacctgctctaaccactaggctacctggttctaaccactaggttacctggttctaaccactaggctacctgctctaaccactaggctacctggttctaaccactaggctacctggttctaaccactaggctacctggttctaaccactaggctacctggttctaaccactaggctacctggttctaaccactaggctacctggctctaaccactaggctacctgc
>TU112414
tacctgctctaaccactaggctacctgctctaaccactaggctacctggttctaaccactaggttacctggttctaaccactaggctacctgctctaaccactaggctacctggttctaaccactaggctacctggttctaaccactaggctacctggttctaaccactaggctacctgctctaaccactaggctacctggttctaaccactaggctacctggttctaaccactaggctacctggttctaaccactaggctacctggctctaaccact
>TU112415
tacctgctctaaccactaggctacctgctctaaccactaggctacctggttctaaccactaggctacctggttctaaccactaggctacctggttctaaccactaggctacctggttctaaccactaggctacctgctctaaccactaggctacctggttctaaccactaggctacctggttctaaccactaggctacctggctctaaccactaggctacctgc
>TU112416
tacctgctctaaccactaggctacctgctctaaccactaggctacctggttctaaccactaggttacctggttctaaccactaggctacctgctctaaccactaggctacctggttctaaccactaggctacctggttctaaccactaggctacctggttctaaccactaggctacctggttctaaccactaggctacctggctctaaccact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112413 False 246 lncRNA 0.39 2 91761468 91761734
TU112414 False 278 lncRNA 0.50 2 91761468 91761831
TU112415 False 224 lncRNA 0.39 2 91761468 91761734
TU112416 True 213 lncRNA 0.41 2 91761468 91761831

Neighbor

gene id symbol gene type direction distance location
LOC110531588 LOC106560822 coding upstream 674876 91076855 ~ 91086592 (+)
LOC110531853 LOC106577418 coding upstream 849611 90903245 ~ 90911857 (+)
LOC110531710 LOC106592262 coding upstream 865384 90870561 ~ 90896084 (+)
LOC110518968 LOC106564289 coding upstream 896916 90844513 ~ 90864552 (+)
LOC118966085 LOC106595486 coding upstream 962824 90647231 ~ 90806871 (+)
LOC118966092 NA coding downstream 71401 91833232 ~ 91837213 (+)
LOC110531613 LOC106577355 coding downstream 115731 91877562 ~ 91884380 (+)
LOC110522569 LOC106613918 coding downstream 250921 92012752 ~ 92084472 (+)
LOC118964553 NA coding downstream 598167 92359998 ~ 92362861 (+)
LOC110533005 clrn3 coding downstream 1265748 93027579 ~ 93034467 (+)
G100992 NA non-coding upstream 2291 91758801 ~ 91759177 (+)
G100988 NA non-coding upstream 11506 91749610 ~ 91749962 (+)
G100979 NA non-coding upstream 35558 91725678 ~ 91725910 (+)
G100977 NA non-coding upstream 39904 91718902 ~ 91721564 (+)
G100971 NA non-coding upstream 56172 91705096 ~ 91705296 (+)
G100994 NA non-coding downstream 860 91762691 ~ 91762890 (+)
G100996 NA non-coding downstream 15747 91777578 ~ 91778088 (+)
G101003 glrx3 non-coding downstream 29967 91791798 ~ 91813137 (+)
G101008 NA non-coding downstream 43735 91805566 ~ 91807952 (+)
G101015 NA non-coding downstream 52780 91814611 ~ 91815584 (+)
G100377 NA other upstream 650606 91109249 ~ 91110862 (+)
G100371 NA other upstream 678747 91080666 ~ 91082721 (+)
G99880 NA other upstream 959139 90643871 ~ 90802329 (+)
G101557 NA other downstream 765188 92527019 ~ 92531819 (+)
G101642 LOC106594265 other downstream 1105845 92867676 ~ 92872700 (+)
G101737 NA other downstream 1254091 93015922 ~ 93016762 (+)
LOC110511695 LOC106577385 other downstream 1984219 93722388 ~ 93770095 (+)

Expression


Co-expression Network