G101070


Basic Information

Item Value
gene id G101070
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 91838920 ~ 91839456 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU112553
CAGTCAGACCAGGGTGTCAGTAGCAGTCAGACCAGGGTGTCAGTAGCAGTCAGACCAGGGTGTCAGTAGCAGTCAGATGAGGGTGTCAGTAGCAGTCAGACCAGGGTGTCAGTAGCAGTCAGATGATCAGGAGAAAGTAGAGGGGACCGAAAGGGAACATGAAAAGTGCAATTGTCCAAAACATCCCTAAGGAAATCAAAATAATTCCACATCCATAAAATGATACTTGTCATGGTTGGTCTGCGTGAAGCCTGcatccatcccaaatggcaccctatatcctacatagtacactactttggaccatagccctatgggtcctggtccaaagtagtgcactacgtagggtacCATTTTTGATGCAGACTATATCATCACCCTGCTCATTACGTCTTCATGAAGGGCTCTTCTGGGGCACACTTGATCTCCCAATATGAGTTGGAGGGGATTTCTCTTTTCCATTTTATTAGCAGCTAAGCTCTTTACACTTGTAGCATATTGCAGCAGGTTTCAAGCTTATACTTTATTGTCTTACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112553 True 537 lncRNA 0.53 1 91838920 91839456

Neighbor

gene id symbol gene type direction distance location
LOC110531398 glrx3 coding downstream 6541 91791792 ~ 91832379 (-)
LOC118966091 tcerg1l coding downstream 308473 91317168 ~ 91530447 (-)
LOC110531579 LOC106577354 coding downstream 719541 91090411 ~ 91119379 (-)
LOC110516041 jakmip3 coding downstream 766204 90982735 ~ 91072716 (-)
LOC118936689 dpysl4 coding downstream 868329 90919995 ~ 90970591 (-)
LOC118966740 NA coding upstream 704433 92543889 ~ 92544887 (-)
LOC118966741 NA coding upstream 777600 92617056 ~ 92622002 (-)
LOC118966742 NA coding upstream 1008008 92847464 ~ 92848944 (-)
LOC118966095 NA coding upstream 1009584 92849040 ~ 92850460 (-)
LOC110528622 LOC106592985 coding upstream 1029146 92868602 ~ 93019314 (-)
G101067 NA non-coding downstream 15250 91823441 ~ 91823670 (-)
G101027 NA non-coding downstream 32385 91805295 ~ 91806535 (-)
G101028 NA non-coding downstream 36279 91801467 ~ 91802641 (-)
G101059 NA non-coding downstream 39660 91799012 ~ 91799260 (-)
G101072 NA non-coding upstream 546 91840002 ~ 91840580 (-)
G101078 NA non-coding upstream 8722 91848178 ~ 91848691 (-)
G101081 NA non-coding upstream 13038 91852494 ~ 91852965 (-)
G101082 NA non-coding upstream 14263 91853719 ~ 91854018 (-)
G101083 NA non-coding upstream 15268 91854724 ~ 91855118 (-)
G100582 NA other downstream 605132 91232740 ~ 91233788 (-)
G100197 NA other downstream 979948 90625080 ~ 90858972 (-)
G99602 NA other downstream 1874715 89963873 ~ 89964205 (-)
G102060 NA other upstream 752125 92591581 ~ 92595514 (-)
G102083 NA other upstream 797842 92637298 ~ 92638881 (-)
G102119 NA other upstream 899557 92739013 ~ 92739530 (-)
G102158 NA other upstream 1034113 92873569 ~ 92874498 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000087_01052680_01055038 NA coding CI01000087 null 1052488 ~ 1055783 (+)