G101251


Basic Information

Item Value
gene id G101251
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 92074773 ~ 92075741 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU112784
gttaagaacaaattcttatttacaatgacggcctacaggggaacagtgggtcacCTGCCTTGTTCAGATGCAGAACAAATGATGTTTACatttcggttactgtcccaaagctctaaccactaggttacctggttctaaccactaggttacctggttctaaccactaggttacctggttctaaccactaggctacctggttctaaccactaggctacctggttctaaccactaggctacctggttctaactACTAGgctacctggttctaaccactaggctacctggttctaaccactaggctacctggttctaactACTAGactacctggttctaaccactaggctacctggttctaaccactaggctacctggttctaaccactaggttacctggttctaaccactagactacctgcc
>TU112786
tacctggttctaaccactagactacctggttctaaccactagactacctggttctaaccactagactacctggttctaaccactaggctacctggttctaaccactagactacctggttctaaccactagactacctggttctaaccactaggttacctggttctaaccactagactacctggctctaaccactaggttacctggttctaaccactagactacctggttctaaccactaggctacctggttctaaccactaggctacctggttctaaccactaggttacctggttctaaccactagactacctgcc
>TU112783
gttaagaacaaattcttatttacaatgacggcctacaggggaacagtgggtcacCTGCCTTGTTCAGATGCAGAACAAATGATGTTTACatttcggttactgtcccaaagctctaaccactaggttacctggttctaaccactaggttacctggttctaaccactaggttacctggttctaaccactaggctacctggttctaaccactaggctacctggttctaaccactaggctacctggttctaactACTAGgctacctggttctaaccactaggctacctggttctaaccactaggctacctggttctaactACTAGGTTAC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU112784 False 419 lncRNA 0.46 3 92074773 92075741
TU112786 False 316 lncRNA 0.37 3 92074773 92075352
TU112783 True 326 lncRNA 0.45 2 92075130 92075741

Neighbor

gene id symbol gene type direction distance location
LOC110531398 glrx3 coding downstream 242394 91791792 ~ 91832379 (-)
LOC118966091 tcerg1l coding downstream 544326 91317168 ~ 91530447 (-)
LOC110531579 LOC106577354 coding downstream 955394 91090411 ~ 91119379 (-)
LOC110516041 jakmip3 coding downstream 1002057 90982735 ~ 91072716 (-)
LOC118936689 dpysl4 coding downstream 1104182 90919995 ~ 90970591 (-)
LOC118966740 NA coding upstream 468148 92543889 ~ 92544887 (-)
LOC118966741 NA coding upstream 541315 92617056 ~ 92622002 (-)
LOC118966742 NA coding upstream 771723 92847464 ~ 92848944 (-)
LOC118966095 NA coding upstream 773299 92849040 ~ 92850460 (-)
LOC110528622 LOC106592985 coding upstream 792861 92868602 ~ 93019314 (-)
G101236 NA non-coding downstream 26520 92046209 ~ 92048253 (-)
G101202 NA non-coding downstream 91340 91983208 ~ 91983433 (-)
G101198 NA non-coding downstream 95581 91978888 ~ 91979192 (-)
G101185 NA non-coding downstream 118679 91955759 ~ 91956094 (-)
G101176 NA non-coding downstream 129108 91944518 ~ 91945665 (-)
G101252 NA non-coding upstream 2563 92078304 ~ 92078678 (-)
G101253 NA non-coding upstream 5257 92080998 ~ 92084982 (-)
G101259 NA non-coding upstream 19634 92095375 ~ 92095590 (-)
G101277 NA non-coding upstream 45559 92121300 ~ 92121972 (-)
G101282 NA non-coding upstream 70484 92146225 ~ 92149412 (-)
G100582 NA other downstream 840985 91232740 ~ 91233788 (-)
G100197 NA other downstream 1215801 90625080 ~ 90858972 (-)
G99602 NA other downstream 2110568 89963873 ~ 89964205 (-)
G102060 NA other upstream 515840 92591581 ~ 92595514 (-)
G102083 NA other upstream 561557 92637298 ~ 92638881 (-)
G102119 NA other upstream 663272 92739013 ~ 92739530 (-)
G102158 NA other upstream 797828 92873569 ~ 92874498 (-)

Expression


Co-expression Network