G101554


Basic Information

Item Value
gene id G101554
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 92521652 ~ 92523010 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU113145
ATTTTAGTGTGCATCATCAAATCAactcaaagtgtatttgtcacgtgcaccgaatataacaggtgtaggtagacctcacagtgaaatgctgaatacaacagttgtagtagacctcacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgccgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113145 True 368 lncRNA 0.49 2 92521652 92523010

Neighbor

gene id symbol gene type direction distance location
LOC118964553 NA coding upstream 158791 92359998 ~ 92362861 (+)
LOC110522569 LOC106613918 coding upstream 438668 92012752 ~ 92084472 (+)
LOC110531613 LOC106577355 coding upstream 637272 91877562 ~ 91884380 (+)
LOC118966092 NA coding upstream 684439 91833232 ~ 91837213 (+)
LOC110531588 LOC106560822 coding upstream 1435060 91076855 ~ 91086592 (+)
LOC110533005 clrn3 coding downstream 504569 93027579 ~ 93034467 (+)
LOC118966102 NA coding downstream 523016 93046026 ~ 93047232 (+)
LOC110501964 LOC106589166 coding downstream 898770 93421780 ~ 93475392 (+)
LOC110511695 LOC106577385 coding downstream 1199378 93722388 ~ 93770095 (+)
LOC110517068 LOC106577343 coding downstream 1258469 93781479 ~ 94002963 (+)
G101550 NA non-coding upstream 7394 92513874 ~ 92514258 (+)
G101543 NA non-coding upstream 53669 92467753 ~ 92467983 (+)
G101533 NA non-coding upstream 69718 92451598 ~ 92451934 (+)
G101505 NA non-coding upstream 103902 92417450 ~ 92417750 (+)
G101495 NA non-coding upstream 117325 92403831 ~ 92404327 (+)
G101557 NA non-coding downstream 4009 92527019 ~ 92531819 (+)
G101559 NA non-coding downstream 10252 92533262 ~ 92540302 (+)
G101575 NA non-coding downstream 51757 92574767 ~ 92575378 (+)
G101607 NA non-coding downstream 134569 92657579 ~ 92657936 (+)
G101610 NA non-coding downstream 146585 92669595 ~ 92670082 (+)
G100377 NA other upstream 1410790 91109249 ~ 91110862 (+)
G100371 NA other upstream 1438931 91080666 ~ 91082721 (+)
LOC110531710 LOC106592262 other upstream 1638438 90870561 ~ 90896084 (+)
G99880 NA other upstream 1719323 90643871 ~ 90802329 (+)
G101642 LOC106594265 other downstream 344666 92867676 ~ 92872700 (+)
G101737 NA other downstream 492912 93015922 ~ 93016762 (+)
G102505 NA other downstream 1310114 93833124 ~ 93835192 (+)

Expression


Co-expression Network