G102001


Basic Information

Item Value
gene id G102001
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 93755861 ~ 93756549 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU113802
tgtagtgttctatattggtgtagtgttctatattggtgtagtgttctatattggtgtagttttctagtgttctatattgttgtagtgttctatattggtgtagtgttctatattggtgtagtgttctatattggtgtagtgttctatattggtgtagtgttctatattggtgtagtgttctatattggtgtagtgttctatat

Function

NR:

description
ubiquitin-associated protein 2-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113802 True 203 lncRNA 0.32 2 93755861 93756549

Neighbor

gene id symbol gene type direction distance location
LOC110501964 LOC106589166 coding upstream 280469 93421780 ~ 93475392 (+)
LOC118966102 NA coding upstream 708629 93046026 ~ 93047232 (+)
LOC110533005 clrn3 coding upstream 721394 93027579 ~ 93034467 (+)
LOC118964553 NA coding upstream 1393000 92359998 ~ 92362861 (+)
LOC110522569 LOC106613918 coding upstream 1672877 92012752 ~ 92084472 (+)
LOC110517068 LOC106577343 coding downstream 24930 93781479 ~ 94002963 (+)
LOC110515218 LOC106591983 coding downstream 254130 94010679 ~ 94040287 (+)
LOC118966112 NA coding downstream 267361 94023910 ~ 94027476 (+)
LOC110515885 hem4 coding downstream 297732 94054281 ~ 94067997 (+)
mmp21 mmp21 coding downstream 316521 94073070 ~ 94089003 (+)
G102000 NA non-coding upstream 3598 93751500 ~ 93752263 (+)
G101994 NA non-coding upstream 26643 93728732 ~ 93729218 (+)
G101974 NA non-coding upstream 67454 93686718 ~ 93688407 (+)
G101961 NA non-coding upstream 91071 93664102 ~ 93664790 (+)
G101959 NA non-coding upstream 96423 93658852 ~ 93659438 (+)
G102003 NA non-coding downstream 520 93757069 ~ 93759164 (+)
G102490 NA non-coding downstream 18827 93775376 ~ 93775906 (+)
G102492 NA non-coding downstream 21204 93777753 ~ 93780721 (+)
G102509 NA non-coding downstream 94263 93850812 ~ 93854543 (+)
G102514 NA non-coding downstream 119404 93875953 ~ 93876452 (+)
G101737 NA other upstream 739099 93015922 ~ 93016762 (+)
G101642 LOC106594265 other upstream 883161 92867676 ~ 92872700 (+)
G101557 NA other upstream 1224042 92527019 ~ 92531819 (+)
LOC118966092 NA other upstream 1919219 91833232 ~ 91837213 (+)
G100377 NA other upstream 2644999 91109249 ~ 91110862 (+)
G102505 NA other downstream 76575 93833124 ~ 93835192 (+)
G102710 NA other downstream 454500 94211049 ~ 94212908 (+)
G102740 NA other downstream 488948 94245497 ~ 94247931 (+)
G102769 NA other downstream 558144 94314693 ~ 94393315 (+)
G102912 NA other downstream 732133 94488682 ~ 94522297 (+)

Expression


Co-expression Network