G102711


Basic Information

Item Value
gene id G102711
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 94214493 ~ 94215105 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU114826
ttctggATAAAATAACGttcttttttaaaacatttattctgGATCAATAATTgttcttgtttaaaaaaaaaattctggatcaataattgttcttgttttttattttttttctggatcaataattgttcttgttttttattttttttctggatcaataATTGTTCTTGTTTTTTATTGTAGTTGATCATTTGAAAAGCAGTCTTCATGACGAACGACTGCTGAGTTTTATTAGTGCCAATAGAAAGTATCCCACCTGTGGCGAAGGTGTTGTGGACACCGTGGAAGGAGATGGCGTTGACGGGATAGACCTGTTCTATGCCGTTCTCCTTCAGCCGGTGGCACTTGAAGGCGTACTTCTTCTTCTGCATTTCCTGGCTGGGGTCCAGGTACTCCACAGCAACACGTCCTTCTATGGAGCTCAGGACGTAGCCCTTCAAAAACAGACAATAAACACCTGGTCACATAGGCccttcaaaaacaaacaaacacctgGTCACACCAGACAGACAACGATGTGTGGTCCTGTCGGGCTCAGCTGGTTAGAGTGTGACACTTAGCAATGCCAaggtcatgggg

Function

NR:

description
LOW QUALITY PROTEIN: mitotic checkpoint protein BUB3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114826 True 576 lncRNA 0.38 2 94214493 94215105

Neighbor

gene id symbol gene type direction distance location
mmp21 mmp21 coding upstream 125490 94073070 ~ 94089003 (+)
LOC110515885 hem4 coding upstream 146496 94054281 ~ 94067997 (+)
LOC110515218 LOC106591983 coding upstream 174206 94010679 ~ 94040287 (+)
LOC118966112 NA coding upstream 187017 94023910 ~ 94027476 (+)
LOC110517068 LOC106577343 coding upstream 211530 93781479 ~ 94002963 (+)
LOC118936691 LOC106575474 coding downstream 58756 94273861 ~ 94278575 (+)
LOC110533014 LOC106575474 coding downstream 126842 94341947 ~ 94346115 (+)
LOC110514579 LOC106592849 coding downstream 307291 94522396 ~ 94559917 (+)
LOC110519363 LOC105888795 coding downstream 350903 94566008 ~ 94639453 (+)
LOC118966139 NA coding downstream 426116 94641221 ~ 94642172 (+)
G102725 NA non-coding upstream 10850 94202285 ~ 94203643 (+)
G102720 NA non-coding upstream 17818 94181376 ~ 94196675 (+)
G102709 NA non-coding upstream 72306 94141710 ~ 94142187 (+)
G102692 NA non-coding upstream 78911 94128806 ~ 94135582 (+)
G102694 NA non-coding upstream 82399 94127965 ~ 94132094 (+)
G102733 NA non-coding downstream 9097 94224202 ~ 94224440 (+)
G102734 NA non-coding downstream 11183 94226288 ~ 94226572 (+)
G102737 LOC106575477 non-coding downstream 17023 94232128 ~ 94232480 (+)
G102738 NA non-coding downstream 18033 94233138 ~ 94233339 (+)
G102739 NA non-coding downstream 26974 94242079 ~ 94242333 (+)
G102710 NA other upstream 1585 94211049 ~ 94212908 (+)
G102505 NA other upstream 379301 93833124 ~ 93835192 (+)
LOC110511695 LOC106577385 other upstream 445005 93722388 ~ 93770095 (+)
G101737 NA other upstream 1197731 93015922 ~ 93016762 (+)
G101642 LOC106594265 other upstream 1341793 92867676 ~ 92872700 (+)
G102740 NA other downstream 30392 94245497 ~ 94247931 (+)
G102769 NA other downstream 99588 94314693 ~ 94393315 (+)
G102912 NA other downstream 273577 94488682 ~ 94522297 (+)
G102936 NA other downstream 339959 94555064 ~ 94556189 (+)
G103091 NA other downstream 551069 94766174 ~ 94766557 (+)

Expression


Co-expression Network