G102988


Basic Information

Item Value
gene id G102988
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 94582591 ~ 94585584 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU115307
atctatttcaccacagctgaaggtacattatagctctatttcaccacagctgaaggtatgttatagatctatttcaccacagctgaaggtacgttatagatctatttcaccacagttgaaggtacattatagatctatttcaccacagctgaaggtacgttatagatctatttcatcacagctgaaggtatgttatagatctatttcaccacagctgaaggtacgttatagatctatatcaccacagctgaaggtatgttatagatctatatcaccacagctgaaggtacgttatagatctatatcaccacagctgaaggtatgttatagatctatttcaccacagctgaaggtacattatagatctatttcaccacagctgaaggtacgttatagatctatttcaccacagctgaaggtacgttatagatctatttcaccacagctgaaggtatgttatagatctatttcaccacagctgaaggtatgttatagatctatttcaccacagctgaaggtacgttatagatctatttcaccacagctgaaggtacattatagatctatttcaccacagctgaaggtatgttatagacctatttcaccacagctgaaggtatgttatagatctatttcaccacagctgaaggtacattatagatctatttcaccacagctgaaggtacgttatagatctatttcaccacagctgaaggtatgttatagacctatttcaccacagctgaaggtatgttatagatctatttcaccacagctgaaggtacgttatagatctatttcaccacagctgaaggtacgttatagatctatttcaccacagctgaaggtatgttatagatctatttcaccacagctgaaggtatgttatag

Function

NR:

description
uncharacterized protein LOC110014726 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU115307 True 891 lncRNA 0.38 2 94582591 94585584

Neighbor

gene id symbol gene type direction distance location
LOC110514579 LOC106592849 coding upstream 22674 94522396 ~ 94559917 (+)
LOC110533014 LOC106575474 coding upstream 236476 94341947 ~ 94346115 (+)
LOC118936691 LOC106575474 coding upstream 304016 94273861 ~ 94278575 (+)
mmp21 mmp21 coding upstream 493588 94073070 ~ 94089003 (+)
LOC110515885 hem4 coding upstream 514594 94054281 ~ 94067997 (+)
LOC118966139 NA coding downstream 55637 94641221 ~ 94642172 (+)
LOC110499554 mtr coding downstream 57109 94642693 ~ 94715672 (+)
LOC110511675 ryr2 coding downstream 131571 94717155 ~ 95250071 (+)
LOC118966140 NA coding downstream 515411 95100995 ~ 95101738 (+)
LOC118966142 LOC106577302 coding downstream 889195 95474779 ~ 95478784 (+)
G102999 NA non-coding upstream 4001 94577244 ~ 94578590 (+)
G102937 NA non-coding upstream 26148 94555420 ~ 94556443 (+)
G102933 NA non-coding upstream 35295 94539073 ~ 94547296 (+)
G102914 NA non-coding upstream 35920 94542044 ~ 94546671 (+)
G102928 NA non-coding upstream 69160 94513105 ~ 94513431 (+)
G103007 NA non-coding downstream 47240 94632824 ~ 94634350 (+)
G103008 NA non-coding downstream 50956 94636540 ~ 94637328 (+)
G103057 NA non-coding downstream 58940 94644524 ~ 94644830 (+)
G103060 NA non-coding downstream 70633 94656217 ~ 94656980 (+)
G103064 NA non-coding downstream 126764 94712348 ~ 94712921 (+)
G102936 NA other upstream 26402 94555064 ~ 94556189 (+)
G102912 NA other upstream 60294 94488682 ~ 94522297 (+)
G102769 NA other upstream 189276 94314693 ~ 94393315 (+)
G102740 NA other upstream 334660 94245497 ~ 94247931 (+)
G102710 NA other upstream 369683 94211049 ~ 94212908 (+)
G103091 NA other downstream 180590 94766174 ~ 94766557 (+)
G103584 NA other downstream 893205 95478789 ~ 95480329 (+)
G103605 NA other downstream 978755 95564339 ~ 95565530 (+)
G103633 NA other downstream 1106403 95691987 ~ 95694076 (+)

Expression


Co-expression Network