LOC118937328


Basic Information

Item Value
gene id LOC118937328
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1588820 ~ 1589368 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034597.1
CAATCCCCTGTCTCTATATCAGACTACCAGGTTGACCATCACAATCCCCTGTCTCTATATCAGACTACCAGGTTGACCATCACAATCCCCTGTCTCTATATCAGACTACCAGGTTGACCATCACAATCCCCTGTCTCTATATCAGACTACCAGGTTGACCATCACAATCCCCTGTCTCTATATCAGACTACCAGGTCTCTATATCAGACTACCAGGTTGACCATCACAATCCCCTGTCTCTATATCAGACTACCAGGTTGACCATCACAATCCCCTGTCTCTATATCAGACTACCAGGTTGACCATCACAATCCCCTGTCTCTATATCAGACTACCAGGTTGACCATCACAATCCCCTGTCTCTATATCAGACTACCAGGTTGACCATCACAATCCCCTGTCTCTATATCAGACTACCAGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034597.1 True 422 mRNA 0.46 3 1588820 1589368

Neighbor

gene id symbol gene type direction distance location
LOC118937327 NA coding upstream 170 1585657 ~ 1588650 (+)
LOC118937324 NA coding upstream 15399 1570310 ~ 1573421 (+)
stt3b stt3b coding upstream 24515 1456336 ~ 1564305 (+)
LOC118937323 NA coding upstream 162543 1424316 ~ 1426453 (+)
tgfbr2b LOC106606173 coding upstream 197884 1309202 ~ 1390936 (+)
LOC118937325 NA coding downstream 15772 1605140 ~ 1606773 (+)
gpd1l LOC105023484 coding downstream 94193 1683561 ~ 1698369 (+)
tmem42a LOC106595323 coding downstream 115521 1704889 ~ 1707675 (+)
LOC110514512 LOC105016610 coding downstream 155930 1745298 ~ 1794938 (+)
slc6a3 slc6a3 coding downstream 227440 1816808 ~ 1853570 (+)
G105001 NA non-coding upstream 48610 1538977 ~ 1540210 (+)
G104999 NA non-coding upstream 73779 1514533 ~ 1515041 (+)
G104997 NA non-coding upstream 74575 1512292 ~ 1514245 (+)
G104992 NA non-coding upstream 95797 1492302 ~ 1493023 (+)
G105014 NA non-coding downstream 227 1589595 ~ 1591453 (+)
G105019 NA non-coding downstream 8218 1597586 ~ 1597987 (+)
G105020 NA non-coding downstream 8817 1598185 ~ 1599541 (+)
G105049 NA non-coding downstream 44369 1633737 ~ 1634417 (+)
G105052 NA non-coding downstream 51454 1640822 ~ 1641037 (+)
G104761 NA other upstream 435071 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 716305 860459 ~ 872515 (+)
G104092 NA other upstream 887549 690046 ~ 701271 (+)
G103851 NA other upstream 1407798 174996 ~ 181022 (+)
G105036 NA other downstream 109705 1699073 ~ 1700431 (+)
G105042 NA other downstream 119601 1708969 ~ 1710557 (+)
G106019 NA other downstream 931348 2520716 ~ 2527972 (+)
G106122 NA other downstream 1128593 2717961 ~ 2718525 (+)
G106240 NA other downstream 1385455 2974823 ~ 3039475 (+)

Expression


Co-expression Network