mylipb (LOC106596795)


Basic Information

Item Value
gene id mylipb
gene name LOC106596795
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5812247 ~ 5839646 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036935966.1
CCCCACGGTTGTATTTTTGGACACGTCCTGATCGGTCCATGGACGGTAAAGTTTGAATGTTTGTTTTTCCTGTAAAGTGTAAGTGCATCGATAGATTAAACTACTATAGGACAACTATTGCAAACATACAGATAAATAAAAATGCTTTGCCATATAACGCGACCGGACTCGATGGTGATGGAGGTGGATGTTGATTCGAAGGCTAATGGAGAGGACTGTTTACACAAGGTCTGTCGGAAACTGGGAATAATAGAGGTGGATTACTTTGGGCTTCAGTTCTGTGGAAGCAAAGGGGAGAGTTTGTGGTTGAATCTCAGGAACAGGATCTCCCAACAGATGGATAACCTGTCTCCCTGCAGACTGAAGCTTAGAGTCAAGTTCTTTGTGGAACCCCATCTGACCCTGCAAGAACAGACACGACATATGTTCTTCCTGCACATAAAGGAGGAGCTGGACAGTGGCAGCCTGCAGATGGAGGCTGAGCAGGCCAAGGAGCTGTGTGCCCTCCTAGCCCAGGCTGAGTACGGAGACTACAACCAGAACACAGCCAAGTACTGCTCCAGCCAGATCTTCAGACAGGAGCCTGACCTGGCAACCATCAACAGCATCCAGGAGAAGCACCGTGAGCTAGAGGGTCTGAGCCAGGCGTCAGCAGAGTACCAGGCCCTACAGCTGGTGTCCTCCCTGGAGAACTACGGGGTGGAGTGGCACTGGGCCAGGGACTCAGAGGGACAGAGGCTGGCCATAGGGGTCGGCCCTGAAGGGGTATCTATCTGTCAGGAGGACTTCACCCCCACCAACAGGATCATTTATCCCATCATCCAGATGGCCACCCAGTCAGGGAAGAATGTGTACATGACCATCACTAAGGACAGTGGTGAGGATGTGGCCCTGCTGTTTAAAATGACAAGCACCAGAGCTGCCAGCGGCCTGTACCGGGCCATCACAGAGACCCACGCCTTCTACAGGTGTGACACGGTGACGAACGACGTGATGATGCAGTACAGCCGTGACTTCAAGGGTCACCTGGCGTCTCTCTTCCTCAACGAGAACATCGACCTGGGCAAGAAGTATGTCTTCGACATCCGACGCACCTCCAAGGAAGTCTACGACCACTGCCGCAGGGCGCTCTACAACGCCGGCATGGCAGGGGACTGTGTGTCCGGCGAGCAGAGCCCGTCGCGGTCCCCTGGGGTGGGGGAAGGAGGCTGTGAGGGGTGCCAGAGGAGCCGGGTTCTGGAGGAGAAGCTGCAGCAGCTCCAGGATGCTCTGCTGTGTATGCTGTGCTGTGAAGAGGAGATGGACGCTGCCTTCTGCCCCTGTGGACACATGGTGTGCTGCCACAACTGTGCCGTCCAGCTAGAGGTGTGTCCGGTGTGTCGGTCAGAGGTAGACCATGTCCAACACATCTACCTGCCCACCTGTGCCAACCTGCTGTCCCTGGCAGTGAGCAGTGCTGCCCCCTTCAATATTCCCAGAGACCTGGCCACTCACCTCTGTTCCTCCAGAGAGTTCTACACCAGCACAGACCAGATCTGTCACACGTAGATTTACTTCCAAATAGCTATCATTGCTATcattgctaacgttagctagctaaaaatcTGGAGGTctcccctcaatcttagctagttggctaacgttagctagctaaaaatcTGGAGGTctcccctcaatcttagctagctggctaacgttagctagctaaaatccggaggtctcccctcaatcttagctagctggctaacgttatactgcatctaaagttAATCCGgcgacatcaaaatgatgaaaaatggttttcctactaattatttgccgCCTTTAGAAATGTCATTGTGTTTTCAAGCCACAGTAATAAACTTTAGACTGAATATTCATCAGTCCCCAATGAggatgcattgagtagaatgttCAGTTGGGCATCAGTCCTAAAACAAACcttcaaaacaatattgtgaaGCAACGTGCAAACCATAAATACCAGGGGTAGTGCTGTAGTAATATACCAGTAGTAGTGCTGTAGTAGTATACCAGGGGTAGTGCTGTAGTAGTATACCAGTAGTAGTGCTGTAGTAGTATACCAGTAGTAGTGCTGTAGTAGTTGTATACCAGGGGTAGTGCTGTAGTAGTTGTATACCAGGGGTAGTGCTGTAGTAGTTGTATACCAGTAGTAGTGCTGTAGTAGTTGTATACCAGGGGTAGTGCTGTAGTAGTTGTATACCAGGGGTAGTGCTGTAGTAGTTGTATACCAGGGGTAGTGCTGTAGTAGTTGTATACCAGGGGTAGTGCTGTAGTAGTATACCAGTAGTAGTGCTGTAGTAGTATACCAGTAGTAGTGCTGTAGTAGTTGTATACCAGTAGTAGTGCTGTAGTAGTATACCAGTAGtagtgctgtagtagtagtataccAGTAGTAGTGCTGTAGTAGTTGTATACCAGTAGTAGTGCTGTAGTAGTATACCaggggtagtactgtagtaggaaTATACCAAGGGGTAGTATACCAGTAGTGTAGTAGTACTGCAGTAttggtgttgtagtagtagtgtgcTACTGTATGAGGTGCTATATGACTGCAAACAGTATCATTCTGAACATTaatttctctggcaacagctctggtggacattcctgcagtcagcatgccaactgcacgctccctcaacttgagacatctatggtattgtgttgtgtgacaactgcacattttagaacaatcttttattgtcccccccagctcaaggtgcacctgtgtaaggattgtgctgtttaatcaacttcttgatatgccagcTTCTTGATTATCTTGGCACAGGGGAAATGCTCACTTACCAGGGATGTAAACAGATTtgtgcacaatttgagagaaataagctttttgttcagtatatgtatacTTTACACTCCATTGTATTTTGATATCTTTATCTCTGCCATATATAAACGGTATATACATGTGATGTCTCTGACCATAGTGTTGAAAAAGTCATTACATTAGACTAGAAGAGTGTACCAGACCAGGTAAAtagtctttattttattattatttatcagggcccatagggctgtaatgaagtagtgcactatatagggtgtccGTTGGGATGGATGTTCCCACTGTCTTCCACAGATGAGTTACTCAATTTATCTTCTGGCCTGCAGCGAGTTCAAAAAATGTACCATACCAGGCCTGTTACCAGTCTACAGAAGTCACATTATTGCTTCTCATACCCCCcggcatcccactgctggcttgctcaGATCTAAGCATGGTTGTCCCtggatgctgctggaagtggtgttggagggccagtaggtggCACCCTTTTCTCTgctct

Function

NR:

description
PREDICTED: E3 ubiquitin-protein ligase MYLIP-A-like isoform X5

GO:

id name namespace
GO:0030178 negative regulation of Wnt signaling pathway biological_process
GO:0016567 protein ubiquitination biological_process
GO:0007369 gastrulation biological_process
GO:0005829 cytosol cellular_component
GO:0005856 cytoskeleton cellular_component
GO:0005515 protein binding molecular_function
GO:0008270 zinc ion binding molecular_function
GO:0016874 ligase activity molecular_function

KEGG:

id description
K10637 MYLIP, MIR; E3 ubiquitin-protein ligase MYLIP

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036935966.1 True 3341 mRNA 0.48 7 5812247 5839646

Neighbor

gene id symbol gene type direction distance location
jarid2a LOC106573577 coding upstream 58400 5615996 ~ 5753847 (+)
LOC110506279 LOC106595015 coding upstream 219994 5575366 ~ 5592253 (+)
dync1i1 LOC105016552 coding upstream 239629 5542994 ~ 5572618 (+)
ptp4a3b LOC106596188 coding upstream 269380 5480975 ~ 5542867 (+)
ccn4b wisp1 coding upstream 355117 5451499 ~ 5457130 (+)
LOC110505528 gmpr coding downstream 1871 5841517 ~ 5854355 (+)
LOC110505637 LOC106573538 coding downstream 114335 5953886 ~ 5958813 (+)
LOC110505679 LOC106579367 coding downstream 136554 5976200 ~ 6002265 (+)
LOC118937375 NA coding downstream 138620 5978266 ~ 5979890 (+)
setd2 LOC106593284 coding downstream 163346 6002992 ~ 6049501 (+)
G108709 NA non-coding upstream 5307 5806421 ~ 5806940 (+)
G108707 NA non-coding upstream 7205 5804086 ~ 5805042 (+)
G108702 NA non-coding upstream 29326 5780214 ~ 5782921 (+)
G108698 NA non-coding upstream 33016 5775907 ~ 5779231 (+)
G108699 NA non-coding upstream 33500 5776870 ~ 5778747 (+)
G108646 NA non-coding downstream 15609 5855255 ~ 5855783 (+)
G108722 NA non-coding downstream 40291 5879937 ~ 5880466 (+)
G108630 NA non-coding downstream 41497 5881143 ~ 5882036 (+)
G108647 NA non-coding downstream 43448 5883094 ~ 5885133 (+)
G108682 NA other upstream 86668 5719965 ~ 5725579 (+)
G108354 LOC106573122 other upstream 512314 5296179 ~ 5299933 (+)
G108733 NA other downstream 60865 5900511 ~ 5900950 (+)
G108775 LOC106606109 other downstream 217350 6056996 ~ 6058335 (+)
G108805 LOC106594197 other downstream 357286 6151712 ~ 6199341 (+)

Expression


Co-expression Network