LOC110505528 (gmpr)


Basic Information

Item Value
gene id LOC110505528
gene name gmpr
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5841517 ~ 5854355 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036936009.1
GGAGAGCCTGTTAGCATCTGGAGGTTCAGGGTTGGCTACTGTCTGGGTCTCAGCAGACCACATCACAGGCTCCATGTTTATCTAGTGATTCATAGAATTATTGATTTATTGGACTGGGACAGGGATTGGACCATCCCGGAGGTGACAGGCCATCATGCCTCGGATAGACGTGGATGTGAAGCTGGACTTTAAAGATGTCCTGTTCAGACCCAAGAGAAGCAGCCTGAAGAGCAGGTCAGAGGTGGACCTACGGAGGACGTTCACGTTCCGTAATTCCAAACAGAGTTACCATGGCATCCCCATCATCGCTGCCAACATGGACACCACGGGCACCTTTGAGATGGCACAGGTCCTCAGCAAGCAAACTCTCTTCACCGCCGTGCAGAAGCACTACACTGTGGAGGAGTGGAAGGATTTTGCAGCCAAGTTTCCAGAATGTTTGGAGCACGTAGCGGTCAGTTCAGGCAGCGGTCAAGCCGACCTGGAGAAGCTGTGCAGCGTCCTGGAGGCCGTCTCTGACATCAGATTCGTCTGTCTGGACGTGGCCAACGGCTACTCTGAACACTTTGTGGAGTTTGTCAAAACCGTCAGGGGGAGGTTTCCTCAACACACTATCATGGCTGGCAACGTGGTGACaggagagatggtggaggagcTGATCCTGGCAGGAGCTGACATCATTAAAGTGGGTATTGGGCCAGGTTCTGTGTGTACGACGCGCATTAAGACGGGAGTGGGATACCCCCAGCTCAGTGCTGTCATAGAGTGTGCAGACTCCGCCCACGGCCTGAAGGCTCACATCATCTCAGATGGCGGATGCAGCTGTCCTGGGGATGTGGCTAAGGCATTTGGCGCTGGAGCTGATTTTGTGATGCTGGGGGGCATGCTGGCTGGCCACGACCAGTGTGCCGGGGAGGTCATTGAGAAGAATGGCAGAAAGGTCCAGCTGTTCTATGGGATGAGCTCTGACACGGCCATGAAGAAACATGTAGGGGGAGTGGCAGAGTACAGAGCATCAGAGGGCAGGACGGTGGAGGTACCGTACAGGGGGGATGTAGAGGCCACCATCAGGGACATTCTGGGTGGTCTGCGCTCCACCTGCACCTACGTAGGAGCTGCCAAACTGAAGGAGCTCAGTCGCAGGACCACCTTTATCAGAGTCACACAGCAGGCCAGCCACATGTTCACATAGTAGTAaatggatggacggatggacaACATAATCTTTCTTGTTTCAATTGTGCTGATTTAACTTCAAATGTAAAAGTGTGAATCTACAACAATATTTACGTGAATGCATGcgttttttttgttgcctgtACACAGTAAACAGAAAGAGGAGAAACAGAATGAAAtaccaacctggactcaggggtagacgtaacatagtaaacttaTATCCGTGACACTCCAAATAGTATGATGTGTAACGTTTGGCATgctattcatttgtggatgtccatcttCCATTTCGTACAATATGTTGCGAATTagcaaaacgtatgatatgttatgaattctaaTTTGTTGAGGCTAAAGTtatctaggtggctaacgttaatGTTAgccaggttaggggttaaggttaggagttaggttaaggttaggggaagggttagctaacatgctaagtagttacaaagtTACAAAAAATTGGTAAGTAGTTCCAAAGTTGCTAATTAGATCAAATTCTAAAATTGTCTGTGATGTTATTCATACACACAGCCTTTGGGTTGCTTGATGTTCATGTTTTACACCTACCCAACCTGACCAACCACTCTACTTTTGTTTTTtgtcttaagtaaccttctgtcttatgtaaccataccaaatgtaacatattatAATAAATTGAGTGTTTCGAAAtctggatttacatttactatgttacgtgtAGTATATGACACCAGGCTGGAAAAACAGTACTAGAGTATGTTACGTGTAGTCTATGAGGCCAGGCTGGAAAAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaTACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTAAGCAGCTGCTCTGTTGCTCCTCTTGAAAGACGAATGACAGAATTTCAGTTGACTCTGTTATTTATTATTCTGAGTATACAGAGACAGTACATTTGTTCacgttc
>TU123515
GTGCTAGAGTATGTTACgtgtagtctatgagaccaggctggaaaAACAGAGTGCTAGAGTAAGCAGCTGCTCTGTTGCTCCTCTTGAAAGACGAATGACAGAATTTCAGTTGACTCTGTTATTTATTATTCTGAGTATACAGAGACAGTACATTTGTTCacgttcttttgtgtttctttaAACAAATTTGTTGAAATCTAAATGAAACGTTTAAAAAAATGACCACTGAAATATTTTGTCCATAAACCTGCAAAAACTCTCTAAGAAAGAGACCATAGATCATACAGAACAGATTGGAGTATATCCTACAAATTAAACCGTAATACCACAGTTAGAAAAGCAACTT

Function

symbol description
gmpr Predicted to enable GMP reductase activity and metal ion binding activity. Predicted to be involved in purine nucleotide metabolic process. Predicted to act upstream of or within nucleotide metabolic process and purine nucleobase metabolic process. Predicted to be part of GMP reductase complex. Orthologous to human GMPR (guanosine monophosphate reductase).

GO:

id name namespace
GO:0009117 nucleotide metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0003920 GMP reductase activity molecular_function
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036936009.1 False 3287 mRNA 0.46 9 5841517 5854174
TU123515 True 346 lncRNA 0.35 1 5854010 5854355

Neighbor

gene id symbol gene type direction distance location
mylipb LOC106596795 coding upstream 1871 5812247 ~ 5839646 (+)
jarid2a LOC106573577 coding upstream 87670 5615996 ~ 5753847 (+)
LOC110506279 LOC106595015 coding upstream 249264 5575366 ~ 5592253 (+)
dync1i1 LOC105016552 coding upstream 268899 5542994 ~ 5572618 (+)
ptp4a3b LOC106596188 coding upstream 298650 5480975 ~ 5542867 (+)
LOC110505637 LOC106573538 coding downstream 99807 5953886 ~ 5958813 (+)
LOC110505679 LOC106579367 coding downstream 122026 5976200 ~ 6002265 (+)
LOC118937375 NA coding downstream 124092 5978266 ~ 5979890 (+)
setd2 LOC106593284 coding downstream 148818 6002992 ~ 6049501 (+)
LOC118937376 NA coding downstream 237905 6092079 ~ 6093940 (+)
G108712 NA non-coding upstream 6998 5833656 ~ 5834519 (+)
G108709 NA non-coding upstream 34577 5806421 ~ 5806940 (+)
G108707 NA non-coding upstream 36475 5804086 ~ 5805042 (+)
G108702 NA non-coding upstream 58596 5780214 ~ 5782921 (+)
G108698 NA non-coding upstream 62286 5775907 ~ 5779231 (+)
G108646 NA non-coding downstream 1081 5855255 ~ 5855783 (+)
G108722 NA non-coding downstream 25763 5879937 ~ 5880466 (+)
G108630 NA non-coding downstream 26969 5881143 ~ 5882036 (+)
G108647 NA non-coding downstream 28920 5883094 ~ 5885133 (+)
G108723 NA non-coding downstream 32086 5886260 ~ 5886472 (+)
G108682 NA other upstream 115938 5719965 ~ 5725579 (+)
G108354 LOC106573122 other upstream 541584 5296179 ~ 5299933 (+)
G108733 NA other downstream 46337 5900511 ~ 5900950 (+)
G108775 LOC106606109 other downstream 202822 6056996 ~ 6058335 (+)
G108805 LOC106594197 other downstream 342758 6151712 ~ 6199341 (+)

Expression


Co-expression Network