Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944179 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 12925357 ~ 12925439 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005039490.1 | True | 83 | mRNA | 0.24 | 1 | 12925357 | 12925439 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525147 | LOC106570794 | coding | downstream | 34961 | 12813650 ~ 12890396 (-) |
| LOC118937723 | LOC106561136 | coding | downstream | 209747 | 12683093 ~ 12715610 (-) |
| LOC118937724 | NA | coding | downstream | 241582 | 12683058 ~ 12683775 (-) |
| pop1 | LOC106561139 | coding | downstream | 251483 | 12639702 ~ 12673874 (-) |
| LOC118944197 | NA | coding | downstream | 307663 | 12617506 ~ 12617694 (-) |
| LOC110507522 | LOC106606066 | coding | upstream | 137651 | 13063090 ~ 13083743 (-) |
| LOC110507534 | LOC106606051 | coding | upstream | 160730 | 13086169 ~ 13094428 (-) |
| LOC118937728 | NA | coding | upstream | 172106 | 13097545 ~ 13127127 (-) |
| abhd5a | LOC106573494 | coding | upstream | 250726 | 13176165 ~ 13189012 (-) |
| LOC118937744 | NA | coding | upstream | 321517 | 13246956 ~ 13250244 (-) |
| G114497 | NA | non-coding | downstream | 6356 | 12918342 ~ 12919001 (-) |
| G114502 | NA | non-coding | upstream | 12104 | 12937543 ~ 12937830 (-) |
| G114506 | NA | non-coding | upstream | 18046 | 12943485 ~ 12961942 (-) |
| G114510 | NA | non-coding | upstream | 62506 | 12987945 ~ 12988251 (-) |
| G114511 | NA | non-coding | upstream | 62981 | 12988420 ~ 12988629 (-) |
| G114513 | NA | non-coding | upstream | 66859 | 12992298 ~ 12992590 (-) |
| G114442 | NA | other | downstream | 186200 | 12735314 ~ 12739157 (-) |
| G114424 | NA | other | downstream | 216042 | 12707827 ~ 12709315 (-) |
| G114402 | NA | other | downstream | 311677 | 12610669 ~ 12613680 (-) |
| G114390 | NA | other | downstream | 340217 | 12584027 ~ 12585140 (-) |
| LOC110513475 | LOC106592216 | other | downstream | 1266689 | 11471939 ~ 12290710 (-) |
| LOC110513400 | snrk | other | upstream | 370394 | 13250306 ~ 13324680 (-) |
| G114812 | NA | other | upstream | 405309 | 13330748 ~ 13332506 (-) |
| LOC110534058 | LOC106593045 | other | upstream | 569009 | 13494448 ~ 13500298 (-) |
| G114928 | LOC106574568 | other | upstream | 649096 | 13574535 ~ 13582606 (-) |
