LOC118939546 (LOC106582469)


Basic Information

Item Value
gene id LOC118939546
gene name LOC106582469
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 35492817 ~ 35498083 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036947099.1
TCCTTACCTCCACCCTCTCTTCAGACGCCCCTGTCCTTCTGGAAGAGTCCAAGTGCACAGTGGTGAGGGAGGGAGTCCAGTGTGTTTGCATGGCTACGGGTAACCCTGAGCCCATCATCGAGTTCTACCTCCCCGACAAGAACATCACCATCAACGACACGGACGGCCGCTACAACTACTACACGCACACGGACGGCCACACGTCCACGGGCATGATAAAACTACGGGAGAAGGGCGAGCGCCTGGGCAACGGTGCTGTCAATGTGCACTGCAGCATCAGCAACATATACGGGTCGGAGAGCTTTCATCTGGAGTTACAGCAGGAGAAGAAGTACATGATGGCAGTGATTGTTGGCACCATCGGTGGAGTGGCTGTCATCGCCTTCATCATCGCAGCAGTGAGATATGTGGGCCATAACAACAAGAAAGAGAATGGCAACCCTGGGCAGGACCTGGTCTCTAAACTGGAGAACCCAGCGTTGTACTACAGCACAGTCAAGAAGGACAAACAATGTCTGAGGAAGAAAGTGGGAGAAGACGGGGATTATCAACCTGTGGGCTCTATGGCAGACCTGGAGAGGCAAGAGCTGAATTACGCCGCCCTGCAGTTTCTCGGGGGGCGCTCCAGGGATGGGGGGGCCTCAGGGAGGGGGGATGACGGCAGCGACTACACCGAGATCAAGGCCAAATGAATCGCGATCCTTCCCTGACCCATCGTCACCGCGGGACACAGTGGCAGCCATGTTGTCGCCCCCCTCCTCACGTCATTCGCCCCCTCTTCAAACGTCTTCCCCCCTCCCCCGTAGACTCCACCCCCAACCTTCACCGTCACACCAAGAACTCCCACCGTCTCCGCCCGTCCCTGAATCATCTCAAATGACGTCCCCGTTAGTCGACCCCCAAGCCTCCAAGGGGAACCCCAGTCACATCTCGCCACCCAGGACTGCTGGTAGCTACTTGCAGGGTCAGAACACGGCCCAGTGGACAATGTAAAAAGATCTTTGTATTATCAGCAGCTGTCGGTCTCCAGGCTCTTACTCTATTGTTCATAGTCAAACAATTCCCTCACAACAGGTGCAATGCgttagttactgtactgtatcatctAGATTCAATGTTGCTATTTCCATCTCTACACCATTAATTGTTGGCATTGCTTTTCTGGGGCTCCCCTTCTGTATGTCACCCTATATCATACTCATagctagcctggttaaaccagattGAACGCTGAGCTCACCAGTTTTCCTGTGAAACGCAGCGCAATCAGTTTGGATACCAGGCTAACTGTCTAGATCCATCCGTTATAGTTCTTCTCCACTGTGTCCGCTGCCAGTCGAAGTGTCAGGGAAAGGGGTGTGTTTTGTGCTTTTTCTTttcttatctctatttctgacccTGGATCTGGAGGAAATGAGggatctcttctctcttcctgatCCAGTGGTTGTCAACGCTGACCAGTGTTCAACAAACGTTAGGCCTGAtacacatccaattgaagccTGTCATCTTCATCTCACATATTCTGTTCCAACATATAGTTCAATAGTGATGTGTGCTGTGACTCTGTGGCTTTTGATGATGATGAGAAATGAATATTTCTTTGATTTTATATAAAGAGAGAAAATTGATACTCTTACAGGTTTGTGGAGCCTCGAACACAAGGTTCTGCTCGTGCAAGAAGTGGCCtgaatatttttgtttttatgcATTATAAGCACTGATTGCATTGTGTTTTGCTCTTGTGGAAATATGCCGGGGTAACACAGAATGTTCTATTTATTCCGTTGCCCATGATTTAATTACTAGTATTTTTGGACGATGTTTTGCTAAGGGTAAGTGTTAACTTATCCTTAAATGGGAACCAATGGATTAGAATACATTTTTGGATCAATCTGGCATACATGACTCCACTGTAACACTCGCACAGCAGGACAAAATGTATCTCGTtgagacaatgtgtgtgtgtgtgtatgtaaacagTGCTGAAAGATCAGCGAACACTGATCACTGTGGGTGTTTCAAAAGATCACTTTACCTGAGACCGCTTCTCACAAAATGTCTACTTCAATGGTTGTGAAGTGTGAAATCGATGCCTAATCCTATAGGGTTGTATCAGAGGAGGCATTTGAGTGGCACAACATTGAAGTTGTTATACCAGTTGGTTGTGCTATTCAAACATACTTGATCAACTCATGTAATGTAATCTCCAAGCTCACTAATGGCAACACTAGATAACAATGACTGTTAATACAATATTAATAAGCTGCATATGGATGGGTAAAAAGATACTAGTATACATTATGTAAATAAATACCCTGCATGACTATTATGCTGTCAGCCATATGTGTAGATACACTACGGTATGTACATGTTCACTATTGCAACAATGGTTTACACAGGCAAGTCGGATACAGGTTCGGTAACACTTTAACTGACTTCTCTGTCATAAGGGTGACATAACGctgtcataacataacacatgTCATTTTCGGTCATGAAAACTGATGTCAAAATACTGACAACCCTTTACACTGTCATGACACAAATGGGTATTTATGTAAATTAGTTGGCTAGCGGTATGCTAAGCCAATAACCTGACTGAAGCAAAGATTTGTGCCATGACGGTGTCAAGCTTATGTCAGCTGTCATGACTGTTTAATAACATATTTTATGTCATTGTTCTGACATGGTTAAGTCACTAGACCTAATGGCGGAGCGTTCAAGATGTGTTGCCCAACATTGAGACATGCCAATATGGACATCCGTTTAGTAACACTTACTGTCGTCAGTTCTCTTGAACGCCTCATGGGGGGGTTTATTTCTTTCTAAACCTGGGAACAAAATGGAGAAGCGTTGTTCATGTCTTCTCTAATTTGTTTGTCACATAGTGTGTTGTAAAGCAGATTTGTACTTTCTTTACTTTGTggtattcattattattattgtgatgatttttttttttatatctttgACACAATAATTCCGATCAGAATTCTGCAATCCTTCTGCAAATTAGCACTGTTATTACTTAATGACAATAAGAGCTCTATGATGATGTTTGATCATTCTCTTTCTTTTACAAGTCTGTCCCGCCTCAAGCAAAGCCATCTTTCTTTGGGTCCAAACAACAAATAAATCAAGTAAACAACAGAGAA
>XM_036947095.1
ACCTCCACCCTCTCTTCAGACGCCCCTGTCCTTCTGGAAGAGTCCAAGTGCACAGTGGTGAGGGAGGGAGTCCAGTGTGTTTGCATGGCTACGGGTAACCCTGAGCCCATCATCGAGTTCTACCTCCCCGACAAGAACATCACCATCAACGACACGGACGGCCGCTACAACTACTACACGCACACGGACGGCCACACGTCCACGGGCATGATAAAACTACGGGAGAAGGGCGAGCGCCTGGGCAACGGTGCTGTCAATGTGCACTGCAGCATCAGCAACATATACGGGTCGGAGAGCTTTCATCTGGAGTTACAGCAGGAGAAGAAGTACATGATGGCAGTGATTGTTGGCACCATCGGTGGAGTGGCTGTCATCGCCTTCATCATCGCAGCAGTGAGATATGTGGGCCATAACAACAAGAAAGAGAATGGCAACCCTGGGCAGGACCTGGTCTCTAAACTGGAGAACCCAGCGTTGTACTACAGCACAGTCAAGAAGGACAAACAATGTCTGAGGAAGAAAGTGCTTAAGACAGAGCTTCTGGGCTCAAAGTTTAACTCCATTCTAGAGGAGAGCACGGGAGAAGACGGGGATTATCAACCTGTGGGCTCTATGGCAGACCTGGAGAGGCAAGAGCTGAATTACGCCGCCCTGCAGTTTCTCGGGGGGCGCTCCAGGGATGGGGGGGCCTCAGGGAGGGGGGATGACGGCAGCGACTACACCGAGATCAAGGCCAAATGAATCGCGATCCTTCCCTGACCCATCGTCACCGCGGGACACAGTGGCAGCCATGTTGTCGCCCCCCTCCTCACGTCATTCGCCCCCTCTTCAAACGTCTTCCCCCCTCCCCCGTAGACTCCACCCCCAACCTTCACCGTCACACCAAGAACTCCCACCGTCTCCGCCCGTCCCTGAATCATCTCAAATGACGTCCCCGTTAGTCGACCCCCAAGCCTCCAAGGGGAACCCCAGTCACATCTCGCCACCCAGGACTGCTGGTAGCTACTTGCAGGGTCAGAACACGGCCCAGTGGACAATGTAAAAAGATCTTTGTATTATCAGCAGCTGTCGGTCTCCAGGCTCTTACTCTATTGTTCATAGTCAAACAATTCCCTCACAACAGGTGCAATGCgttagttactgtactgtatcatctAGATTCAATGTTGCTATTTCCATCTCTACACCATTAATTGTTGGCATTGCTTTTCTGGGGCTCCCCTTCTGTATGTCACCCTATATCATACTCATagctagcctggttaaaccagattGAACGCTGAGCTCACCAGTTTTCCTGTGAAACGCAGCGCAATCAGTTTGGATACCAGGCTAACTGTCTAGATCCATCCGTTATAGTTCTTCTCCACTGTGTCCGCTGCCAGTCGAAGTGTCAGGGAAAGGGGTGTGTTTTGTGCTTTTTCTTttcttatctctatttctgacccTGGATCTGGAGGAAATGAGggatctcttctctcttcctgatCCAGTGGTTGTCAACGCTGACCAGTGTTCAACAAACGTTAGGCCTGAtacacatccaattgaagccTGTCATCTTCATCTCACATATTCTGTTCCAACATATAGTTCAATAGTGATGTGTGCTGTGACTCTGTGGCTTTTGATGATGATGAGAAATGAATATTTCTTTGATTTTATATAAAGAGAGAAAATTGATACTCTTACAGGTTTGTGGAGCCTCGAACACAAGGTTCTGCTCGTGCAAGAAGTGGCCtgaatatttttgtttttatgcATTATAAGCACTGATTGCATTGTGTTTTGCTCTTGTGGAAATATGCCGGGGTAACACAGAATGTTCTATTTATTCCGTTGCCCATGATTTAATTACTAGTATTTTTGGACGATGTTTTGCTAAGGGTAAGTGTTAACTTATCCTTAAATGGGAACCAATGGATTAGAATACATTTTTGGATCAATCTGGCATACATGACTCCACTGTAACACTCGCACAGCAGGACAAAATGTATCTCGTtgagacaatgtgtgtgtgtgtgtatgtaaacagTGCTGAAAGATCAGCGAACACTGATCACTGTGGGTGTTTCAAAAGATCACTTTACCTGAGACCGCTTCTCACAAAATGTCTACTTCAATGGTTGTGAAGTGTGAAATCGATGCCTAATCCTATAGGGTTGTATCAGAGGAGGCATTTGAGTGGCACAACATTGAAGTTGTTATACCAGTTGGTTGTGCTATTCAAACATACTTGATCAACTCATGTAATGTAATCTCCAAGCTCACTAATGGCAACACTAGATAACAATGACTGTTAATACAATATTAATAAGCTGCATATGGATGGGTAAAAAGATACTAGTATACATTATGTAAATAAATACCCTGCATGACTATTATGCTGTCAGCCATATGTGTAGATACACTACGGTATGTACATGTTCACTATTGCAACAATGGTTTACACAGGCAAGTCGGATACAGGTTCGGTAACACTTTAACTGACTTCTCTGTCATAAGGGTGACATAACGctgtcataacataacacatgTCATTTTCGGTCATGAAAACTGATGTCAAAATACTGACAACCCTTTACACTGTCATGACACAAATGGGTATTTATGTAAATTAGTTGGCTAGCGGTATGCTAAGCCAATAACCTGACTGAAGCAAAGATTTGTGCCATGACGGTGTCAAGCTTATGTCAGCTGTCATGACTGTTTAATAACATATTTTATGTCATTGTTCTGACATGGTTAAGTCACTAGACCTAATGGCGGAGCGTTCAAGATGTGTTGCCCAACATTGAGACATGCCAATATGGACATCCGTTTAGTAACACTTACTGTCGTCAGTTCTCTTGAACGCCTCATGGGGGGGTTTATTTCTTTCTAAACCTGGGAACAAAATGGAGAAGCGTTGTTCATGTCTTCTCTAATTTGTTTGTCACATAGTGTGTTGTAAAGCAGATTTGTACTTTCTTTACTTTGTggtattcattattattattgtgatgatttttttttttatatctttgACACAATAATTCCGATCAGAATTCTGCAATCCTTCTGCAAATTAGCACTGTTATTACTTAATGACAATAAGAGCTCTATGATGATGTTTGATCATTCTCTTTCTTTTACAAGTCTGTCCCGCCTCAAGCAAAGCCATCTTTCTTTGGGTCCAAACAACAAATAAATCAAGTAAACAACAGAGAA

Function

NR:

description
myelin-associated glycoprotein-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036947099.1 False 3161 mRNA 0.45 4 35492817 35498083
XM_036947095.1 True 3210 mRNA 0.45 5 35492822 35498083

Neighbor

gene id symbol gene type direction distance location
LOC118939545 LOC106582469 coding upstream 15435 35472123 ~ 35477382 (+)
LOC118939544 LOC106605239 coding upstream 22411 35441730 ~ 35470406 (+)
LOC118936740 LOC106582469 coding upstream 38759 35445101 ~ 35454058 (+)
LOC118936739 LOC106605239 coding upstream 48787 35442141 ~ 35444030 (+)
LOC110488530 LOC106605238 coding upstream 60912 35406919 ~ 35431905 (+)
LOC110488566 LOC106605239 coding downstream 8574 35506657 ~ 35512190 (+)
LOC110534853 NA coding downstream 28003 35526086 ~ 35540448 (+)
LOC110488573 LOC106605190 coding downstream 50037 35548120 ~ 35554239 (+)
LOC110488583 LOC106582465 coding downstream 69119 35567202 ~ 35573160 (+)
LOC110488622 LOC106605163 coding downstream 246144 35744227 ~ 35751886 (+)
LOC110488522 lsr non-coding upstream 86873 35396335 ~ 35405972 (+)
G136202 NA non-coding upstream 97634 35394744 ~ 35395183 (+)
G136201 LOC106584099 non-coding upstream 99029 35393308 ~ 35393788 (+)
G136199 NA non-coding upstream 101533 35391068 ~ 35391284 (+)
G136554 NA non-coding downstream 76041 35574124 ~ 35574329 (+)
G136561 NA non-coding downstream 79875 35577958 ~ 35578281 (+)
G136573 NA non-coding downstream 87946 35586029 ~ 35586280 (+)
G136583 NA non-coding downstream 96452 35594535 ~ 35594840 (+)
LOC110488391 LOC106582385 other upstream 308821 35180650 ~ 35184002 (+)
lypc LOC106584559 other upstream 339167 35151760 ~ 35153650 (+)
LOC110488281 apom other upstream 492262 34984948 ~ 35000555 (+)
G135920 LOC106605214 other upstream 520016 34972449 ~ 34972801 (+)
G135916 NA other upstream 520886 34971640 ~ 34971931 (+)
LOC110488639 LOC106605005 other downstream 287608 35785691 ~ 35788114 (+)
LOC100653444 LOC106584591 other downstream 357066 35855149 ~ 35865269 (+)
G136994 NA other downstream 484749 35982832 ~ 36037741 (+)
G137058 LOC106605156 other downstream 601528 36099611 ~ 36100277 (+)
LOC110488849 LOC106605147 other downstream 883809 36354883 ~ 36405310 (+)

Expression


Co-expression Network