XLOC_020687


Basic Information

Item Value
gene id XLOC_020687
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 1182084 ~ 1182479 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042242
acaaatcaacaatcaaacacacaagatgacacacaaacacaaacacacacacacggaagcATATACAGATGCTAACACAGACACTACACAAAACACACAGCGCACCCAAAACAGACAAATATACACAGAAACAAACATAACTTTACAAACACACAACGTACACACACTTATTTCCTCATTTACTTTTATGAATCAGTTCCTAccgttatttatatttaataaaaataaatccaaaataaaaaagcaccaaaaataaacacacactttcatcttgtttttctttttttttatttgtatttataaatcCATACATTACGGGACAAATCTACACACTAGCACATCAAAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042242 True 346 lncRNA 0.31 2 1182084 1182479

Neighbor

gene id symbol gene type direction distance location
XLOC_020686 NA coding downstream 13793 1156430 ~ 1168291 (-)
XLOC_020685 si:ch1073-15f12.3 coding downstream 102311 1073413 ~ 1079773 (-)
XLOC_020684 NA coding downstream 158553 1018345 ~ 1023531 (-)
XLOC_020683 cacna1sa coding downstream 213600 912450 ~ 968484 (-)
XLOC_020682 KCTD20 coding downstream 271158 898131 ~ 910926 (-)
XLOC_020688 ampd2a coding upstream 23308 1205787 ~ 1245226 (-)
XLOC_020689 CU570769.4 coding upstream 47427 1229906 ~ 1230022 (-)
XLOC_020690 NA coding upstream 78471 1260950 ~ 1269440 (-)
XLOC_020691 NA coding upstream 84512 1266991 ~ 1290856 (-)
XLOC_020692 NA coding upstream 133249 1315728 ~ 1316773 (-)
XLOC_020676 NA non-coding downstream 421198 739300 ~ 760886 (-)
XLOC_020675 NA non-coding downstream 446840 733244 ~ 735244 (-)
XLOC_020673 NA non-coding downstream 477177 700213 ~ 704907 (-)
XLOC_020694 NA non-coding upstream 180861 1363340 ~ 1365341 (-)

Expression


Co-expression Network