LOC110501884


Basic Information

Item Value
gene id LOC110501884
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 74111978 ~ 74112847 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110501884
ATGTGCCTGTCAAAGTATTTGCTTTGCAACAATTCTGCAATTAAAGAGCTTGTTGTCAAACTGCAGAGTCTGGTGTCCAGAACATGAGTTCTGAAAGGAAATtgttcagacTGGGGAACACTGTGAACTCCATTGACGAAGCCAGGCAGACTTTGTAGCTCTCTGACCCTGTGCTGCGTTTCTGCCTTACTGTGGCCAACCTCCAACGGCCCTTTGCTTTATCTGCAACAATTTGCTCTGGGCCAGAAATGTTGGCATTGTCTATGATATCAACAAGGAGCAGTGGAGCTTGAATGCCTCTCGTAGCTACTTCTTGCCAAGAAGTTAAGAGTCTAACCAGAGATGTTTATGTTGTTTTCCCAGATTATGGTTCAGAGAACCAAAAATAGGCTGTTTCAACAGAAAATGGATCAGCACCTCAAAGACAGACCCGATCATGCTTTTCTGCTCCTGCTTATTGAGAGTCTTAAAAGACATCCCTCGGTTGCCCTCAACACACTGAAAAACATTTGATATTTCCATTTCACTGGACAGGTTGGGCGTTTACCGGTCAAACCCAGGGGTGGTGGGCTTTTGTGGGCtaatctcctctctgttaggGTTAATGTCACCCCAGTTTGAAAATTAAACCATAA

Function

NR:

description
peroxisomal membrane protein 11A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110501884 True 635 mRNA 0.44 2 74111978 74112847

Neighbor

gene id symbol gene type direction distance location
LOC110495986 LOC106561179 coding downstream 44868 74018519 ~ 74067110 (-)
LOC110495977 NA coding downstream 97565 74010498 ~ 74014413 (-)
LOC110495933 zn710 coding downstream 336530 73768584 ~ 73775448 (-)
si:ch211-107o10.3 LOC106561176 coding downstream 362020 73739182 ~ 73749958 (-)
rasgrf1 LOC106561174 coding downstream 465842 73610274 ~ 73646136 (-)
LOC118941541 NA coding upstream 6219 74119058 ~ 74140876 (-)
LOC110496007 LOC106561184 coding upstream 9436 74122283 ~ 74126209 (-)
LOC110496015 LOC106561186 coding upstream 44226 74157073 ~ 74167350 (-)
LOC110501892 LOC106561189 coding upstream 128390 74241237 ~ 74433222 (-)
LOC110496063 LOC106561200 coding upstream 339685 74452532 ~ 74473316 (-)
G183544 NA non-coding downstream 91882 74019259 ~ 74020096 (-)
G183098 NA non-coding downstream 116977 73994721 ~ 73995001 (-)
G183092 NA non-coding downstream 120303 73991340 ~ 73991675 (-)
G183084 LOC106561177 non-coding downstream 124913 73981328 ~ 73987065 (-)
G183602 NA non-coding upstream 28190 74141037 ~ 74143053 (-)
G183631 NA non-coding upstream 31738 74144585 ~ 74144786 (-)
G183672 LOC106561185 non-coding upstream 84025 74196872 ~ 74198670 (-)
G183601 LOC106561188 non-coding upstream 102470 74215317 ~ 74221649 (-)
G183538 NA other downstream 1187 74106883 ~ 74110791 (-)
G183096 NA other downstream 118433 73993078 ~ 73993545 (-)
G182882 NA other downstream 435555 73676212 ~ 73676423 (-)
G182708 NA other downstream 766131 73344950 ~ 73345847 (-)
LOC110495704 nrg4 other downstream 1033599 73076020 ~ 73078379 (-)
G184006 LOC106561202 other upstream 618025 74730872 ~ 74732637 (-)
LOC110496186 LOC106561212 other upstream 1493380 75595366 ~ 75607735 (-)
G186002 NA other upstream 1764512 75877359 ~ 75878060 (-)
tnni1c LOC106561253 other upstream 1872312 75985156 ~ 75989573 (-)
adm2b adm2 other upstream 1980323 76093170 ~ 76099909 (-)

Expression


Co-expression Network