trnag-gcc-5


Basic Information

Item Value
gene id trnag-gcc-5
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 86724887 ~ 86724957 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnag-gcc-5
GCATTggtggttcagtggtagaattctcgcctgccacgcgggaggcccgggttcgattcccggccaatgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-gcc-5 True 71 mRNA 0.61 1 86724887 86724957

Neighbor

gene id symbol gene type direction distance location
trnag-gcc-4 NA coding upstream 2189 86722628 ~ 86722698 (+)
trnag-gcc-3 NA coding upstream 4448 86720369 ~ 86720439 (+)
trnag-gcc-2 NA coding upstream 5201 86719616 ~ 86719686 (+)
LOC110498595 LOC106561448 coding upstream 100345 86573569 ~ 86624542 (+)
LOC110498585 LOC106561449 coding upstream 160638 86555475 ~ 86564249 (+)
trnag-gcc-6 NA coding downstream 683 86725640 ~ 86725710 (+)
trnag-gcc-7 NA coding downstream 1436 86726393 ~ 86726463 (+)
trnag-gcc-8 NA coding downstream 2189 86727146 ~ 86727216 (+)
trnag-gcc-9 NA coding downstream 2928 86727885 ~ 86727955 (+)
LOC110498682 LOC106561452 coding downstream 62847 86787804 ~ 86873265 (+)
G197901 NA non-coding upstream 16632 86707519 ~ 86708255 (+)
G197920 NA non-coding upstream 17794 86671522 ~ 86707093 (+)
G197932 LOC106561464 non-coding upstream 30702 86685291 ~ 86694185 (+)
G197912 LOC106561447 non-coding upstream 65572 86658695 ~ 86659315 (+)
G197911 NA non-coding upstream 66315 86656218 ~ 86658572 (+)
G198056 NA non-coding downstream 25269 86750226 ~ 86750662 (+)
G198070 LOC106581475 non-coding downstream 33896 86758853 ~ 86759083 (+)
G198071 NA non-coding downstream 34428 86759385 ~ 86759611 (+)
G198086 NA non-coding downstream 47567 86772524 ~ 86772807 (+)
G198130 NA non-coding downstream 112033 86836990 ~ 86837274 (+)
G197069 NA other upstream 588279 86135616 ~ 86136608 (+)
LOC110498034 LOC106573178 other upstream 1704853 85010068 ~ 85054392 (+)
G195155 NA other upstream 2124563 84596410 ~ 84600324 (+)
G194395 NA other upstream 3165289 83558920 ~ 83559598 (+)
LOC110497837 tmem263 other upstream 3599922 83119221 ~ 83124965 (+)
G198417 LOC106561459 other downstream 312554 87037511 ~ 87039236 (+)
G198575 NA other downstream 425245 87150202 ~ 87150490 (+)
G198784 NA other downstream 768666 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 810979 87535936 ~ 87536928 (+)
G199223 hipk3 other downstream 1141920 87866877 ~ 87867967 (+)

Expression


Co-expression Network