XLOC_002073



Basic Information


Item Value
gene id XLOC_002073
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 21103921 ~ 21106710 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00005876
gtcaactcctttctgtgtctcaagtccaccaacatatATGGCGAGCTATGGACAAaatggtaacagcgggaaagacCTCTATCCTGACCACATTCAATCCATGCAGAACTCAGCCAGATGTGCCGACCCCCCTTCAGACACACCCTGCAGCCCTGCGGCATGTTGGGAATGTTCACAGAGCGGAATAAGAGCTGGACAGACCTCACAGTGAACTGCGGACATGTTCTTCTGAAGACACAGAAGAAGAGGCTGCGTACTGTAAATATTCCATCTTCTTCCGTTTTGGAGAAAAGGCCATTAAGACTTGGCAGGGGTTGGGGGTCAAAAGAGGCTCGCAGCTGCAAGAACTAAATATGGAAggattttgacatttaaacagaGATTGTTGTTTATGGAGAGAACATTTGGAGCAGAGGGAAGAAATGCGAAGACGTTGTAATTACTCGCAGCATATGTAATTGTGTGCCATGACTAGAAAGCCTAGAGCTTAATTTTCTGTGATAGTTTGTAAGGACACTTCATTGCATTGTAa

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00005876 True 532 lncRNA 0.45 2 21103921 21106710

Neighbor


gene id symbol gene type direction distance location
XLOC_002072 NA coding upstream 365245 20731614 ~ 20738676 (+)
XLOC_002071 BX548043.1 coding upstream 419771 20684036 ~ 20684150 (+)
XLOC_002070 NA coding upstream 436060 20665016 ~ 20667861 (+)
XLOC_002069 NA coding upstream 458462 20643335 ~ 20645459 (+)
XLOC_002068 prnpb coding upstream 471142 20628698 ~ 20632779 (+)
XLOC_002074 NA coding downstream 72774 21179484 ~ 21208200 (+)
XLOC_002075 BX004886.1 coding downstream 129854 21236564 ~ 21236678 (+)
XLOC_002076 trpc7a coding downstream 288588 21395298 ~ 21428998 (+)
XLOC_002077 BX465186.1 coding downstream 290610 21397320 ~ 21404971 (+)
XLOC_002078 etf1b coding downstream 327939 21434649 ~ 21470593 (+)
XLOC_002066 NA non-coding upstream 601743 20501776 ~ 20502178 (+)
XLOC_002081 NA non-coding downstream 435811 21542521 ~ 21543562 (+)
XLOC_002085 CT737184.1 non-coding downstream 564121 21670831 ~ 21674458 (+)

Expression



Co-expression Network