asb13b (LOC106561665)


Basic Information

Item Value
gene id asb13b
gene name LOC106561665
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 94604044 ~ 94611792 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036959632.1
CCTTATATAACATTCATTCGCTGTATCTAGCTTTTTTGCTGACCAGATCATGAATCTAGCCAATGTTGTCTAGATGTAATACATTTAGGTTAGGACTATGCCTATGCATGTCACCAACCATCACATAGACAGACAGCGGACGTCAGCAACGGCTCATGGCCTGGGGTTCTGGACAGACCGTTCGGCGGTACACGAGGCAGCAGCCCAGGGAAAGGCTCTTCAGCTACAGAAGCTGATCCAGGGAGGTGCAGCAGTTAACATAGTGGCTGTGGACTCCATAACCCCCCTCCACGAGGCCTGCATACAGGGACAAACACAGTGTGTCCGGTTGCTGCTGGACGCTGGTGCTCACGTGGATGCGCGGAACATTGACGGCAGTACCCCGCTGTGCGACGCCTGCGCTGCGGGCAGCCTGGAGTGTGTGAAACTACTCATACAACATGGGGCTACGGTCAACCCTCCACTGTTCACCTTCTCACCCCTCCACGAGGCCTGCATGGGGGgtaACTCTGACTGCGTTCAGCTCATGATAGACGTGGGAGCTCTGATGGAGGCCCATGACTGCCACTTCGGGACACCGTTACATGTAGCGTGTGCCAGACAACACTTTGACTGCGCCAAGGTCCTCCTCAATGCAGGGGCGAACGTGAACGCTGCCAAGCTCCACGAGACGGCGCTCCATCACGCAGCCAAAGTAAAGAACGTGGATCTGATCGAGCTGCTGATTGAGTTTGGTGGGAACATATATGCCAGGGACAACCTGGGCAAAAAGCCCATCAACTACACAAGTCAAGGTTCTCCCACCAATATCTGCCTAGTGTTCTATGAAAATACTCCCCTCAGTCTACAACAGATCAGCAGGATAGCTCTGAGAACAGCACTGGGCAGAAGAGCCCTGGACGACGTGTCCAAACTGGGCTTGCCCAATCGCATCACCTGCTACCTCTCATATCAGCCACCCCCAGATCTGGACTTGGACTTTGACTACTTCTAACAAGTCCAATCCTACTTCTAACAAGCCCCATCCTACTTCTAACAAGCCCCATCCTACTTCTAACAAGCCCCATCCTTACTTCTAACAAGCCCCATCCTTACTTCTAACAAGCCCCATCCTACTTCTAACAAGCCCCATCCTACTTCTAACAAGCCCCATCCTACTTCTAACAAGCCCCATCATACTTCTAACAAGCCCCATCCTTTTTACGAGTCTGTTTTGTCTTGTGCCGAACGATTCCACCACATAGGAataagcctggtcccaggtctgtttgtgttcTTGTCAATGCCAACTCATTGTAATGCTGACATTTTTCAACCAATTAGCATAACAATGGCTGAttgcacaaacagactggccctCAGACTAGATGGGAATGAAGATGCAgggtagcctggttccagatctgtttgcgcgttcttgccaactcctattgtCATTGTCAGGCTAAAAACACATTGACAACGACTATAGGAGTTGTTTATACAattacaaacagatctgggaccaggctagaagcAAGAGAGCCCAAACTCATTTGTCTGAGTTAAGGTTTCAGTTAAACTACAATGAAAAGTAGGGATATGAATGTAAGCTTACTGATGTGACAGGTGTCAGCTAGCTATGCTCGAAAGACTGAGGGCGATACTCAAATCTGTATCGCCGAAGGGTTATATTTCTATCCAGCTGTAAAGGTCATTTCTGATTGAGCCGAGATATCTTAAATGCAGTCTCTACGATacggattgaatctaggcctaagCGTTCCCACTAAGCATAGTCTCATGCTTGTACCCAGATCTATTTGTCCTGCCTTATGTTTGGGATGTTGTGCCTTGCCAACTGCAAGAcggcacaaactgatctgggaccaggctagtctgTCCAACCTTTCTGAATTCTTAAATCTTTTAGCTAAGCTTTTAGGATTGTGTAATTATGTGTACATATCAAACATGTATGTTTATTTTGAATAATGTGTATATAAACTATGTAAATAATACAAATTATTTGATTTATGTAAATTCCATGAATACTGTATATGTCTATTTTGAGTTTATAAGTGTTGCATTTTGTCTTCTTCTGTATGGTTGGAGTGTTAGAAAGGAGGGTGTTGTCGCAGGGGTCAAGTGCACACCCCTTGAAATGAATTTTGTTATCATATTAATTGATTGTATTGTTCTTAATACTTTTTACTCTTCCATTGTTGCTTTACTGAAAATAaatgatgtacagtaccagtcaaaagtttggacacacctactcat
>XM_021577491.2
TGTTCTTTTTAGTTCTGTGTGCTTCTAATTTAAGCCATCATCCACCACTATCAACAACGTTACTGCAGCAATGCTTCACTGGTCTTCTCTGCGTTTTAAAATGCATCAATTTATTCTGCAAGACTAGAGGATATAATATCTATAGCTAAATGGAGATTACTCGTGCCAGACCATCGCTGTTTGGAGATATAGCTCATGGCCTGGGGTTCTGGACAGACCGTTCGGCGGTACACGAGGCAGCAGCCCAGGGAAAGGCTCTTCAGCTACAGAAGCTGATCCAGGGAGGTGCAGCAGTTAACATAGTGGCTGTGGACTCCATAACCCCCCTCCACGAGGCCTGCATACAGGGACAAACACAGTGTGTCCGGTTGCTGCTGGACGCTGGTGCTCACGTGGATGCGCGGAACATTGACGGCAGTACCCCGCTGTGCGACGCCTGCGCTGCGGGCAGCCTGGAGTGTGTGAAACTACTCATACAACATGGGGCTACGGTCAACCCTCCACTGTTCACCTTCTCACCCCTCCACGAGGCCTGCATGGGGGgtaACTCTGACTGCGTTCAGCTCATGATAGACGTGGGAGCTCTGATGGAGGCCCATGACTGCCACTTCGGGACACCGTTACATGTAGCGTGTGCCAGACAACACTTTGACTGCGCCAAGGTCCTCCTCAATGCAGGGGCGAACGTGAACGCTGCCAAGCTCCACGAGACGGCGCTCCATCACGCAGCCAAAGTAAAGAACGTGGATCTGATCGAGCTGCTGATTGAGTTTGGTGGGAACATATATGCCAGGGACAACCTGGGCAAAAAGCCCATCAACTACACAAGTCAAGGTTCTCCCACCAATATCTGCCTAGTGTTCTATGAAAATACTCCCCTCAGTCTACAACAGATCAGCAGGATAGCTCTGAGAACAGCACTGGGCAGAAGAGCCCTGGACGACGTGTCCAAACTGGGCTTGCCCAATCGCATCACCTGCTACCTCTCATATCAGCCACCCCCAGATCTGGACTTGGACTTTGACTACTTCTAACAAGTCCAATCCTACTTCTAACAAGCCCCATCCTACTTCTAACAAGCCCCATCCTACTTCTAACAAGCCCCATCCTTACTTCTAACAAGCCCCATCCTTACTTCTAACAAGCCCCATCCTACTTCTAACAAGCCCCATCCTACTTCTAACAAGCCCCATCCTACTTCTAACAAGCCCCATCATACTTCTAACAAGCCCCATCCTTTTTACGAGTCTGTTTTGTCTTGTGCCGAACGATTCCACCACATAGGAataagcctggtcccaggtctgtttgtgttcTTGTCAATGCCAACTCATTGTAATGCTGACATTTTTCAACCAATTAGCATAACAATGGCTGAttgcacaaacagactggccctCAGACTAGATGGGAATGAAGATGCAgggtagcctggttccagatctgtttgcgcgttcttgccaactcctattgtCATTGTCAGGCTAAAAACACATTGACAACGACTATAGGAGTTGTTTATACAattacaaacagatctgggaccaggctagaagcAAGAGAGCCCAAACTCATTTGTCTGAGTTAAGGTTTCAGTTAAACTACAATGAAAAGTAGGGATATGAATGTAAGCTTACTGATGTGACAGGTGTCAGCTAGCTATGCTCGAAAGACTGAGGGCGATACTCAAATCTGTATCGCCGAAGGGTTATATTTCTATCCAGCTGTAAAGGTCATTTCTGATTGAGCCGAGATATCTTAAATGCAGTCTCTACGATacggattgaatctaggcctaagCGTTCCCACTAAGCATAGTCTCATGCTTGTACCCAGATCTATTTGTCCTGCCTTATGTTTGGGATGTTGTGCCTTGCCAACTGCAAGAcggcacaaactgatctgggaccaggctagtctgTCCAACCTTTCTGAATTCTTAAATCTTTTAGCTAAGCTTTTAGGATTGTGTAATTATGTGTACATATCAAACATGTATGTTTATTTTGAATAATGTGTATATAAACTATGTAAATAATACAAATTATTTGATTTATGTAAATTCCATGAATACTGTATATGTCTATTTTGAGTTTATAAGTGTTGCATTTTGTCTTCTTCTGTATGGTTGGAGTGTTAGAAAGGAGGGTGTTGTCGCAGGGGTCAAGTGCACACCCCTTGAAATGAATTTTGTTATCATATTAATTGATTGTATTGTTCTTAATACTTTTTACTCTTCCATTGTTGCTTTACTGAAAATAaatgatgtacagtaccagtcaaaagtttggacacacctactcat

Function

NR:

description
ankyrin repeat and SOCS box protein 13-like

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0016567 protein ubiquitination biological_process

KEGG:

id description
K10335 ASB13; ankyrin repeat and SOCS box protein 13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036959632.1 False 2265 mRNA 0.46 6 94604044 94611301
XM_021577491.2 True 2305 mRNA 0.46 6 94604044 94611792

Neighbor

gene id symbol gene type direction distance location
LOC110500221 LOC106561669 coding downstream 74436 94526548 ~ 94529608 (-)
LOC110500153 LOC106561673 coding downstream 187036 94412244 ~ 94417008 (-)
LOC110500132 LOC106561675 coding downstream 236850 94364015 ~ 94367194 (-)
LOC110500125 LOC106561674 coding downstream 244122 94348518 ~ 94359922 (-)
LOC110500075 LOC106561651 coding downstream 345211 94251418 ~ 94258833 (-)
LOC110500283 gdi2 coding upstream 54136 94665928 ~ 94686821 (-)
LOC110500320 LOC106604557 coding upstream 165766 94777558 ~ 94781368 (-)
LOC110500345 LOC106561680 coding upstream 348126 94959918 ~ 94974913 (-)
trnay-gua NA coding upstream 397810 95009602 ~ 95009691 (-)
LOC110500368 LOC105021811 coding upstream 403883 95015675 ~ 95020429 (-)
G207227 NA non-coding downstream 21310 94582431 ~ 94582734 (-)
G207226 NA non-coding downstream 21628 94581924 ~ 94582416 (-)
G207225 NA non-coding downstream 22237 94581198 ~ 94581807 (-)
G207205 NA non-coding downstream 48222 94555524 ~ 94555822 (-)
G207194 NA non-coding downstream 81077 94522087 ~ 94522967 (-)
G207251 NA non-coding upstream 21155 94632947 ~ 94633168 (-)
G207255 NA non-coding upstream 23613 94635405 ~ 94635726 (-)
G207258 NA non-coding upstream 25352 94637144 ~ 94639540 (-)
G207261 NA non-coding upstream 32977 94644769 ~ 94645080 (-)
G207262 NA non-coding upstream 33562 94645354 ~ 94645818 (-)
G206750 NA other downstream 275861 94327910 ~ 94328183 (-)
G206744 LOC106561643 other downstream 290126 94313390 ~ 94313918 (-)
G206742 LOC106561643 other downstream 291270 94312424 ~ 94312774 (-)
G205192 NA other downstream 1641110 92962044 ~ 92962934 (-)
LOC110499897 LOC106573100 other downstream 2164443 92398054 ~ 92443838 (-)
G207244 LOC100194703 other upstream 5123 94616915 ~ 94617232 (-)
G207249 NA other upstream 17645 94629437 ~ 94629739 (-)
G207340 LOC105021815 other upstream 150870 94762662 ~ 94776356 (-)
G207858 LOC106561692 other upstream 765931 95377723 ~ 95408714 (-)
G207959 NA other upstream 912176 95523968 ~ 95524227 (-)

Expression


Co-expression Network