Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110500368 |
| gene name | LOC105021811 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 95015675 ~ 95020429 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0006396 | RNA processing | biological_process |
| GO:0019013 | viral nucleocapsid | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| id | description |
|---|---|
| K11098 | SNRPF, SMF; small nuclear ribonucleoprotein F |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021577703.2 | True | 615 | mRNA | 0.43 | 4 | 95015675 | 95020429 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnay-gua | NA | coding | downstream | 5984 | 95009602 ~ 95009691 (-) |
| LOC110500345 | LOC106561680 | coding | downstream | 40762 | 94959918 ~ 94974913 (-) |
| LOC110500320 | LOC106604557 | coding | downstream | 234307 | 94777558 ~ 94781368 (-) |
| LOC110500283 | gdi2 | coding | downstream | 328854 | 94665928 ~ 94686821 (-) |
| asb13b | LOC106561665 | coding | downstream | 403883 | 94604044 ~ 94611792 (-) |
| LOC110502417 | LOC106561684 | coding | upstream | 76950 | 95097379 ~ 95124547 (-) |
| LOC118944198 | NA | coding | upstream | 250664 | 95271093 ~ 95271272 (-) |
| parietopsin | LOC106561711 | coding | upstream | 608020 | 95628449 ~ 95632062 (-) |
| LOC110502485 | LOC106561707 | coding | upstream | 615467 | 95635896 ~ 95664503 (-) |
| LOC110500466 | nampt | coding | upstream | 682930 | 95703359 ~ 95721115 (-) |
| G207283 | NA | non-coding | downstream | 418 | 95013936 ~ 95015257 (-) |
| G207454 | NA | non-coding | downstream | 7489 | 95007980 ~ 95008186 (-) |
| G207421 | NA | non-coding | downstream | 94650 | 94920075 ~ 94921025 (-) |
| G207287 | NA | non-coding | downstream | 149320 | 94863530 ~ 94866355 (-) |
| G207392 | NA | non-coding | downstream | 160306 | 94854648 ~ 94855369 (-) |
| G207462 | NA | non-coding | upstream | 62 | 95020491 ~ 95020717 (-) |
| G207471 | NA | non-coding | upstream | 29455 | 95049884 ~ 95050507 (-) |
| G207487 | NA | non-coding | upstream | 60613 | 95081042 ~ 95081243 (-) |
| G207490 | NA | non-coding | upstream | 65459 | 95085888 ~ 95086181 (-) |
| G207278 | NA | non-coding | upstream | 74794 | 95095223 ~ 95095886 (-) |
| G207340 | LOC105021815 | other | downstream | 239319 | 94762662 ~ 94776356 (-) |
| G207249 | NA | other | downstream | 385936 | 94629437 ~ 94629739 (-) |
| G207244 | LOC100194703 | other | downstream | 398443 | 94616915 ~ 94617232 (-) |
| G206750 | NA | other | downstream | 687492 | 94327910 ~ 94328183 (-) |
| G206744 | LOC106561643 | other | downstream | 701757 | 94313390 ~ 94313918 (-) |
| G207858 | LOC106561692 | other | upstream | 357294 | 95377723 ~ 95408714 (-) |
| G207959 | NA | other | upstream | 503539 | 95523968 ~ 95524227 (-) |
| G207884 | NA | other | upstream | 583799 | 95604228 ~ 95609786 (-) |
| G207876 | LOC106561706 | other | upstream | 661608 | 95680851 ~ 95686864 (-) |
| G208077 | NA | other | upstream | 808945 | 95829374 ~ 95832362 (-) |
