LOC110502485 (LOC106561707)


Basic Information

Item Value
gene id LOC110502485
gene name LOC106561707
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 95635896 ~ 95664503 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036960040.1
GCGCATTCTGTTTCTGTATTTATATACATAACAGCGCTGTAGCCGCATGCATTTACCCAAATCCCACGACGTAGACAGAAGCTACCGACAACCCGAAGGGAACGATATCCATGACCATGACGCCCTTGTCACTGTCATTTTCGAGTCTGTTAAAGAATAAGGATTCTCTGCAGAAGTGTTTCAATTGCTACAATGCCTTCCACGCGCAGCACGACATACCACGGTACTTCAGAAACCGAACGCCGTGGAAGAAGGCTCGGTTATGGGAGCGGAATTTCAGTGCGGTGTCCCACAGTAGGTTCATCGGCCAAGTGTTGGCGAAACAACCCTTTGCCAAAATCTATGCGAAGGAAGCTACTATGTGTACCACTTCTGCAAGTGGCCAAGACATGACCAACTGGTTGTGGTCTATTTACAACGAAACCAAAAAACAGACCGAAGCCCTGATCCCTGTGATATCTAAGAACAGTGTGAACCCCGACACCATCTTTGCCAACAACGAGATGAGTCTGGGTGACATCGAGATCTATGGGTTTGACTATGACTACACTCTGGCCTTCTACTCCAGACACCTCCACACCCTCATCTTTAACATCGCCAGGGACATCCTCATCCAGGAGCACAGGTACCCTGAGGGCTTGAGAGAGTACGAGTACATCCCTAACTTTGTTGTCAGAGGACTGCACTATGATGTCCAAAGGGCTTTGCTGATGAAGATAGATGCCTTTCACTACATACAGCTGGGAACCGTATACAGGGGTCTTCACCCGGTACCAGACAAGGAGGTGATTGCCATGTACGATGGTTGCCATGTCCCTCTGGAGAATATGAGTGACTTCTATGGCAAGagtTCCCATGGCCACACAATGAAACAGTATATGGACATCTTTTCCCTCCCAGAGATGAACCTTCTGTGTTCCGTTaatgactacttcatgaagcacAATATCGACTACGAGCCCGTCCACCTCTACAAAGACGTCAAGgaaGCGATAGGAGATGTCCATGTCAAGGGTATTATGTATCGGGCTGTGGAGGCAGATATCGagaacTATATTTCCTATGGAGAACAGACTCATGCTGTGTTGAAGAAGCTTTATGAGGATGGAAAGAAGATGTTCCTCATCACTAACAGCCCCTTTGACTTTGTGGATCGGGGAATGAACTACATCGTTGGGAAAGACTGGAGAGATCTGTTTGACATTGTCATCGTACAGGCCGACAAACCTGGCTTCTTCAACGACAGGAGAAAGCCCTTCAGGCGAGTGACAGATAAAGGGGTGCTGCATTGGGACAGGATTCACAAGCTGGAGAAGGGGAAGATCTACAAACAGGGAAACCTCTATGAGTTCCTGAGACTGACTGGCTGGAGGGGGTCCAAGGTGTTGTACTTTGGAGATCACATTTACAGTGACCTGGCAGACCTGACCCTGAAGCACGGCTGGAGGACTGGCGCCATCATCCCTGAGCTGAGGAAAGAGATCAAGATCATGAACACTGAGGAATGTGTTCACCTGATGACCTGGTTACAGGGTCTGACTGGGCTGATAGAACACATGCAGgtCCACAGAGATCCAGCTTCTCAAGCTGTCGTCCAGGAGTGGATCGAAGAGAGAGAAGCCATGAGATCGCAGACAAAGGACATCTTCAACGGCCAGTTTGGGAGTCTCTTCCGGACCTACCACAACCCCACCTACTTCTCCCGCCGCCTGTCTCGTTTCGCTGACATCTACATGGCGTCCCTCAGCTGTCTGCTCAACTATGACTTCCATCACACCTTCTTCCCCCGTCGTACGCCCCTGCAACACGAGTCACCCTTCTGGCCCGAGCAGACCAGCGCCGGGGCCCTGAAGATGCCCTTCATACCCCCACAGAACCACAACTGAAGAGTAGAAcaggaaatggggggg

Function

NR:

description
PREDICTED: 5'-nucleotidase domain-containing protein 3-like

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036960040.1 True 1910 mRNA 0.50 13 95635896 95664503

Neighbor

gene id symbol gene type direction distance location
parietopsin LOC106561711 coding downstream 3924 95628449 ~ 95632062 (-)
LOC118944198 NA coding downstream 364624 95271093 ~ 95271272 (-)
LOC110502417 LOC106561684 coding downstream 511349 95097379 ~ 95124547 (-)
LOC110500368 LOC105021811 coding downstream 615467 95015675 ~ 95020429 (-)
trnay-gua NA coding downstream 626205 95009602 ~ 95009691 (-)
LOC110500466 nampt coding upstream 38856 95703359 ~ 95721115 (-)
LOC110533932 NA coding upstream 217628 95882131 ~ 95883679 (-)
LOC110502500 LOC106561698 coding upstream 386799 96051302 ~ 96092405 (-)
LOC110502509 LOC106561697 coding upstream 465808 96129727 ~ 96370206 (-)
LOC110500576 NA coding upstream 969338 96633841 ~ 96640404 (-)
G207880 NA non-coding downstream 481 95634521 ~ 95635415 (-)
G207885 NA non-coding downstream 1544 95634077 ~ 95634352 (-)
G207878 NA non-coding downstream 2481 95632297 ~ 95633415 (-)
G208010 NA non-coding downstream 10890 95624090 ~ 95625006 (-)
G207876 LOC106561706 non-coding upstream 16348 95680851 ~ 95686864 (-)
G207883 NA non-coding upstream 33620 95698123 ~ 95702054 (-)
G208037 NA non-coding upstream 52979 95717482 ~ 95718864 (-)
G208045 NA non-coding upstream 65946 95730449 ~ 95730692 (-)
G208046 NA non-coding upstream 66872 95731375 ~ 95731596 (-)
G207884 NA other downstream 26110 95604228 ~ 95609786 (-)
G207959 NA other downstream 111669 95523968 ~ 95524227 (-)
G207858 LOC106561692 other downstream 227182 95377723 ~ 95408714 (-)
G207340 LOC105021815 other downstream 859540 94762662 ~ 94776356 (-)
G207249 NA other downstream 1006157 94629437 ~ 94629739 (-)
G208077 NA other upstream 164871 95829374 ~ 95832362 (-)
G208472 NA other upstream 469574 96134077 ~ 96134472 (-)
G208658 NA other upstream 757363 96421866 ~ 96422224 (-)
G209560 NA other upstream 1752318 97416821 ~ 97417188 (-)

Expression


Co-expression Network