LOC110500466 (nampt)


Basic Information

Item Value
gene id LOC110500466
gene name nampt
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 95703359 ~ 95721115 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021577854.2
TTATGGAGTTCATATTCGATCAAATTAAGCCTCACGTATCAAACTAGAAATCCACTTTTAGTTTGACCAAATTCGACTATATCTCATTGCCCCCAATACAATAACTCCTCACTTGGTATGCTTAATGTTTATTTTCGAGCGGACAGATTTTAGGCGGAGTCaaccctctcgcttcgcctcttcatCTCTGTTTGTACTTTAGATTCGACAGCGCGTGGCTTAGTGTCCCCGCCCTTCAGCAATCAGATTTTACAATCACGAGGGGAACATGGAGCACGGAGACTTCAATTTCCTGCTGGCTACCGATTCATACAAGGTCACACATTACAAGCAGTACCCTCCCAACACCACCAAGGTTTACTCCTACTTTGAGTGTCGGGCAAAGAAAACTGAATCCACTAAGATTCAGAAAGTGAAATAtgataaaactgtattttatgGACTTCAGTATATCCTTCATAAGTATCTGAAAGGGAAAGTGGTGACTCCACAGAAGATCACAGAAGCAAAGGAAGTTTACCGTGAACACTTTCAGGATGATGTGTTCAACGAAAAGGGCTGGGAGTACATACTGGAGAAGTATGACGGCCACCTGCCCATTGAAATCAAGGCTGTTCCCGAGGGTAGTGTGATCCCCAGAGGTAATGTCCTCTTCACCGTGGAGAGTACTGACCCAGAATGCTACTGGCTCACCAACTGGGTAGAGACAATCCTGGTGCAGATCTGGTACCCCATCACAGTAGCTACTAACTCCAGAGAGCAGAAGAAGATCCTAGCCAGGTATCTACTGGAGACATCAGGGAACCAGGACAAACTGGAGTATAAGCTGCATGACTTTGGCTACAGGGGAGTCTCATCTCAAGAGACTGCTGGCATCGGAGCATCTGCCCACCTGGTGAACTTTAAAGGCACAGACACGGTAGCTGGTATCTGTGTCATTAAGAAGTACTACGGCACCAAAGACCCTGTGCCCGGCTTCTCTGTGCCAGCCGCAGAGCACagCACCATCACCGCCTGGGGTAAGGACCACGAGAAAGATGCCTTTGAGCACATTGTGAGGCAGTTCCCCAACGTGCCCGTGTCCATCGTCAGCGACAGCTACGATATCTACAACGCCTGTGAGAAGATATGGGGAGAGGACCTCAGGAGCCTCATTGAGTCCCGCAGCGCTGACGCACCCTTGGTCATCAGGCCAGACTCAGGAGACCCATTAGATACTGTCCTCAAGGTGTTGGAGATTTTAGGGAGGAAGTTCTGCACCACAGAGAACAGCAGAGGATACAAGGTGCTACCCCCTTACATCCGAGTCATTCAGGGGGATGGTGTGGACATCAACACTCTGCAGGAGATCGTGGCGGGGATGAAGAAACACAGGTGGAGTATAGAGAACGTGGGCTTTGGGTCGGGCGGTGCTCTACTCCAAAAACTGACCCGGGACCTGCTCAGCTGCTGCTTCAAGTGTAGCTTTGTGGTGACCAACGGACTGGGGCTGAATGTGTTCAAGGACCCTGTTGCTGACCCTAACAAAAGATCAAAGAAGGGTCGTCTGTCGCTCCACAGAACACCAACAGGAGACTTTGTGACACTGGAAGAAGGGAAGGGGAGCCTGGAGGAAAACGGTCCAGATCTGCTTCACACCGTTTTCAGAAACGGAGTGATACTGAAGACGTATACATTTGATGAGGTCAGAGACAACGCTAAGATCAGGGACTGTGATCTGGAAGAGTCTGTAGACTGAGGCCTGTACATGCTCCAACACACTACGCAGAAAGGACTGGATCCCTTCTACCTCCCTGTACAGCACTGACCACCAAGGATGATAATAAACAACACTCAACAttgtcctgagagagagagagagagagagacttaattAGCACAACGGTACAAATATATAAACTAAGAAACTATGTATTTTCGACATGTAGGATCATGTACATGTATGATTGAGAAATTatataaaaataacattttattgagaCAAATTAAACTTGAATATTTTGATTTTA

Function

symbol description
nampt Enables identical protein binding activity. Involved in positive regulation of nitric-oxide synthase biosynthetic process and positive regulation of transcription by RNA polymerase II. Located in cell junction and nuclear speck. Implicated in transient cerebral ischemia. Biomarker of carotid artery disease; coronary artery disease; obesity; pulmonary hypertension; and type 2 diabetes mellitus.

NR:

description
nicotinamide phosphoribosyltransferase-like

GO:

id name namespace
GO:0009435 NAD biosynthetic process biological_process
GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity molecular_function

KEGG:

id description
K03462 NAMPT; nicotinamide phosphoribosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021577854.2 True 2009 mRNA 0.47 11 95703359 95721115

Neighbor

gene id symbol gene type direction distance location
LOC110502485 LOC106561707 coding downstream 38856 95635896 ~ 95664503 (-)
parietopsin LOC106561711 coding downstream 71387 95628449 ~ 95632062 (-)
LOC118944198 NA coding downstream 432087 95271093 ~ 95271272 (-)
LOC110502417 LOC106561684 coding downstream 578812 95097379 ~ 95124547 (-)
LOC110500368 LOC105021811 coding downstream 682930 95015675 ~ 95020429 (-)
LOC110533932 NA coding upstream 161016 95882131 ~ 95883679 (-)
LOC110502500 LOC106561698 coding upstream 330187 96051302 ~ 96092405 (-)
LOC110502509 LOC106561697 coding upstream 409196 96129727 ~ 96370206 (-)
LOC110500576 NA coding upstream 912726 96633841 ~ 96640404 (-)
LOC110500541 LOC106561741 coding upstream 926015 96647130 ~ 96897073 (-)
G207883 NA non-coding downstream 1305 95698123 ~ 95702054 (-)
G208014 NA non-coding downstream 8262 95653258 ~ 95695097 (-)
G207876 LOC106561706 non-coding downstream 16495 95680851 ~ 95686864 (-)
G207880 NA non-coding downstream 67944 95634521 ~ 95635415 (-)
G207885 NA non-coding downstream 69007 95634077 ~ 95634352 (-)
G208045 NA non-coding upstream 9334 95730449 ~ 95730692 (-)
G208046 NA non-coding upstream 10260 95731375 ~ 95731596 (-)
G208060 NA non-coding upstream 42679 95763794 ~ 95764050 (-)
G208065 NA non-coding upstream 47741 95768856 ~ 95769161 (-)
G208094 NA non-coding upstream 124544 95845659 ~ 95846084 (-)
G207884 NA other downstream 93573 95604228 ~ 95609786 (-)
G207959 NA other downstream 179132 95523968 ~ 95524227 (-)
G207858 LOC106561692 other downstream 294645 95377723 ~ 95408714 (-)
G207340 LOC105021815 other downstream 927003 94762662 ~ 94776356 (-)
G208077 NA other upstream 108259 95829374 ~ 95832362 (-)
G208472 NA other upstream 412962 96134077 ~ 96134472 (-)
G208658 NA other upstream 700751 96421866 ~ 96422224 (-)
G209560 NA other upstream 1695706 97416821 ~ 97417188 (-)
G209802 NA other upstream 1780057 97501172 ~ 97502394 (-)

Expression


Co-expression Network