G103853


Basic Information

Item Value
gene id G103853
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 183874 ~ 184430 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU116513
GCTGGGTGTGATATGGCTGTAAGGATAAGGTTATAGACCAGTATATCTGGGTGTGATATAGCTGTAAGGATAAGGTTAGCAGTTAACAGTATAGCTGGGTGTGATATGGCTGTAAGGATAAGGTTATAGACCAGTATAGCTGGGTGTGATATGGCTGTAAGGGTAAGGTTATAGACCAGTATAGCTGGGTGTGATATGGCTGTAAGGATAAGGTTATAGACCAGTATAGCTGGGTGTGATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116513 True 242 lncRNA 0.45 2 183874 184430

Neighbor

gene id symbol gene type direction distance location
LOC118936272 LOC106596174 coding upstream 165778 13864 ~ 18096 (+)
zgc:110410 LOC106594189 coding downstream 530300 714730 ~ 722393 (+)
LOC118937316 LOC106573240 coding downstream 540361 724791 ~ 731551 (+)
cmc1 cc068 coding downstream 676029 860459 ~ 872515 (+)
LOC110506977 LOC106595099 coding downstream 721146 905576 ~ 908576 (+)
LOC118936923 NA coding downstream 784186 968616 ~ 969528 (+)
G103798 NA non-coding upstream 2214 169833 ~ 181660 (+)
G103827 NA non-coding upstream 60592 121239 ~ 123282 (+)
G103826 NA non-coding upstream 63038 120332 ~ 120836 (+)
G103790 NA non-coding upstream 128651 54529 ~ 55223 (+)
G103786 NA non-coding upstream 134259 49272 ~ 49615 (+)
G103862 NA non-coding downstream 16310 200740 ~ 202233 (+)
G103864 NA non-coding downstream 19599 204029 ~ 204844 (+)
G103865 NA non-coding downstream 20633 205063 ~ 206020 (+)
G103867 NA non-coding downstream 24476 208906 ~ 209707 (+)
G103871 NA non-coding downstream 35636 220066 ~ 222075 (+)
G103851 NA other upstream 2852 174996 ~ 181022 (+)
G104092 NA other downstream 505616 690046 ~ 701271 (+)
G104761 NA other downstream 968631 1153061 ~ 1153749 (+)
tgfbr2b LOC106606173 other downstream 1124848 1309202 ~ 1390936 (+)
G105036 NA other downstream 1514643 1699073 ~ 1700431 (+)

Expression


Co-expression Network