G103894


Basic Information

Item Value
gene id G103894
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 273840 ~ 275586 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU116575
tactactactagctctactactactattagctctactactactagctctactactactactagctctactactactagctcttctactactattagctctactactactagctctactactactactagctctactactattagctctactactactactagctctactactactatttGCTCTACTACTAAtagttatactactactactagctctactactactactagctctactactactagctctactactactactagaactactactactagctgtactactactactagctctactactactagctctactactactact
>TU116574
atactactactagctctactactactattagctctactactactagctctactactactactagctctaCTACTACTAGCTctactactactagctctactactactactagctctactactactagctctactactactactagaactactactactagctgtactactactactagctctactactactagctctactactactact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116575 False 328 lncRNA 0.37 2 273840 275586
TU116574 True 209 lncRNA 0.49 2 274952 275586

Neighbor

gene id symbol gene type direction distance location
LOC118936272 LOC106596174 coding upstream 255744 13864 ~ 18096 (+)
zgc:110410 LOC106594189 coding downstream 439144 714730 ~ 722393 (+)
LOC118937316 LOC106573240 coding downstream 449205 724791 ~ 731551 (+)
cmc1 cc068 coding downstream 584873 860459 ~ 872515 (+)
LOC110506977 LOC106595099 coding downstream 629990 905576 ~ 908576 (+)
LOC118936923 NA coding downstream 693030 968616 ~ 969528 (+)
G103893 NA non-coding upstream 1886 271025 ~ 271954 (+)
G103891 NA non-coding upstream 6584 266146 ~ 267256 (+)
G103887 NA non-coding upstream 20717 251104 ~ 253123 (+)
G103886 NA non-coding upstream 23290 249619 ~ 250550 (+)
G103878 NA non-coding upstream 36284 236351 ~ 237556 (+)
G103921 NA non-coding downstream 55452 331038 ~ 331370 (+)
G103924 NA non-coding downstream 57681 333267 ~ 333825 (+)
G103947 NA non-coding downstream 98091 373677 ~ 373962 (+)
G103960 NA non-coding downstream 136918 412504 ~ 413154 (+)
G103967 NA non-coding downstream 147733 423319 ~ 442300 (+)
G103851 NA other upstream 92818 174996 ~ 181022 (+)
G104092 NA other downstream 414460 690046 ~ 701271 (+)
G104761 NA other downstream 877475 1153061 ~ 1153749 (+)
tgfbr2b LOC106606173 other downstream 1033692 1309202 ~ 1390936 (+)
G105036 NA other downstream 1423487 1699073 ~ 1700431 (+)

Expression


Co-expression Network