G104033


Basic Information

Item Value
gene id G104033
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 568134 ~ 568550 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU116762
ACAAAATAGCTTGTACTTTATTTCACAACTATAGGTGAATGCAATGGTAGTGTAACCTAAATCATAACCATGAATTAATCTATAGGTGAATGCAATGGTAGTGTACCCTAAATCATAACCATTAATTAATCTATAGGTGAATGCAATGGTAGTGTACCCTAAATCATAACCATGAATTAATCTATAGGTGAATGCAATGGTAGTGTACCCTAAATCATAACCATGAATTAATCTATAGGTGAATGCAATGGTAGTGTAACCTAAATGATGAATTCTCTCTGCTATGAAACAGTTGTAGTGTACATCAATGAAACCATATGAACAACTACATGATATCACTACATACATGATATCACTACATACATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116762 True 366 lncRNA 0.32 2 568134 568550

Neighbor

gene id symbol gene type direction distance location
LOC118936272 LOC106596174 coding upstream 550038 13864 ~ 18096 (+)
zgc:110410 LOC106594189 coding downstream 146180 714730 ~ 722393 (+)
LOC118937316 LOC106573240 coding downstream 156241 724791 ~ 731551 (+)
cmc1 cc068 coding downstream 291909 860459 ~ 872515 (+)
LOC110506977 LOC106595099 coding downstream 337026 905576 ~ 908576 (+)
LOC118936923 NA coding downstream 400066 968616 ~ 969528 (+)
G104024 NA non-coding upstream 17688 549708 ~ 550446 (+)
G104006 NA non-coding upstream 59140 508715 ~ 508994 (+)
G104005 NA non-coding upstream 59512 506726 ~ 508622 (+)
G103987 NA non-coding upstream 101096 466387 ~ 467038 (+)
G103985 NA non-coding upstream 105819 460114 ~ 462315 (+)
G104044 NA non-coding downstream 13685 582235 ~ 585015 (+)
G104047 NA non-coding downstream 18747 587297 ~ 587671 (+)
G104049 NA non-coding downstream 25807 594357 ~ 595015 (+)
G104051 NA non-coding downstream 34960 603510 ~ 603948 (+)
G104060 NA non-coding downstream 49757 618307 ~ 618853 (+)
G103851 NA other upstream 387112 174996 ~ 181022 (+)
G104092 NA other downstream 121496 690046 ~ 701271 (+)
G104761 NA other downstream 584511 1153061 ~ 1153749 (+)
tgfbr2b LOC106606173 other downstream 740728 1309202 ~ 1390936 (+)
G105036 NA other downstream 1130523 1699073 ~ 1700431 (+)

Expression


Co-expression Network