G104102


Basic Information

Item Value
gene id G104102
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 699871 ~ 702351 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU116881
atgacaaagtgaaaacagaaatGTTAGAAACCTCTAATtcacgtaagtattcacacccctgggtcaatacatgttagaatcacctttggatttttgcctgtgcttagctctatttacatttatttttatcctaaaaaacttcCTAGTCTGAtgataagcatacccataacatgatgcagtcaccaacatgcttgaaaatatgaaacgTAGTACTCATTGTACACTCACTACTTGACattgtagcaaaatgtcatttcttcagtgttgtcacattaAAAGATAtcctcaaatatttacaaaaatgtgaggggtgtactcactgataatggccatataccacaaccccccgaggtgccttattgctattataaactggttaccaacataattagagcagtaaaaataaatgttttgtcatacccgtggtatacggtctgatataccacggctctttgccaatcagcattcagggctcgaacaacACAGAGATCATATACTACGGGTATGacgaaaacatgtattttttactgctctaattgctttaatac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116881 True 548 lncRNA 0.36 2 699871 702351

Neighbor

gene id symbol gene type direction distance location
LOC110512917 csmd3 coding upstream 27677 149182 ~ 672194 (+)
LOC118936272 LOC106596174 coding upstream 681775 13864 ~ 18096 (+)
zgc:110410 LOC106594189 coding downstream 12379 714730 ~ 722393 (+)
LOC118937316 LOC106573240 coding downstream 22440 724791 ~ 731551 (+)
cmc1 cc068 coding downstream 158108 860459 ~ 872515 (+)
LOC110506977 LOC106595099 coding downstream 203225 905576 ~ 908576 (+)
LOC118936923 NA coding downstream 266265 968616 ~ 969528 (+)
G104091 NA non-coding upstream 9965 689586 ~ 689906 (+)
G103840 NA non-coding upstream 23496 676014 ~ 676375 (+)
G104072 NA non-coding upstream 56377 640776 ~ 643494 (+)
G104067 NA non-coding upstream 66532 632774 ~ 633339 (+)
G104060 NA non-coding upstream 81018 618307 ~ 618853 (+)
G104106 NA non-coding downstream 38611 740962 ~ 741553 (+)
G104111 NA non-coding downstream 44045 746396 ~ 748276 (+)
G104114 NA non-coding downstream 51348 753699 ~ 754328 (+)
G104116 NA non-coding downstream 54435 756786 ~ 757771 (+)
G103851 NA other upstream 518849 174996 ~ 181022 (+)
G104761 NA other downstream 450710 1153061 ~ 1153749 (+)
tgfbr2b LOC106606173 other downstream 606927 1309202 ~ 1390936 (+)
G105036 NA other downstream 996722 1699073 ~ 1700431 (+)
G105042 NA other downstream 1006618 1708969 ~ 1710557 (+)

Expression


Co-expression Network