G104106


Basic Information

Item Value
gene id G104106
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 740962 ~ 741553 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU116885
TCTTTGTTCTGCTCCTCCACCTGGTTGATGACCTCATAGCGGGTACAGCGGTAGTAACCTCCAGTAGACGAGCTGTGTTTCttccattcctccagacagatcCAGCAGAAGTCATACTTACactgcagagaggcagagagggaagaggagGTAGTCAGTCAGTAGCAGGACATACCAAGGCCCTAACCTCTGGCAAGACTAAAGGTCAGTAGCAGGAAATACCAAGGCCCTAACCTCTGGTATGACTAAAGGTAGTCAGTCAGTAGCAGGAAATACCAAGGCCCTAACCTCTGGCATGGCTAAAGGTAGTCAGTCAGTAGCAGGAAATA
>TU116886
TCTTTGTTCTGCTCCTCCACCTGGTTGATGACCTCATAGCGGGTACAGCGGTAGTAACCTCCAGTAGACGAGCTGTGTTTCttccattcctccagacagatcCAGCAGAAGTCATACTTACactgcagagaggcagagagggaagaggaggtagTCAGTCAGTAGCAGGACATACCAAGGCCCTAACCTCTGGTATGACTAAAGGTCAGTAGCAGGAAATACCAAGGCCCTAACCTCTGGTATGACTAAAGGTAGTCAGTCAGTAGCAGGAAATACCAAGGCCCTAACCTCTGGCATGGCTAAAGGTAGTCAGTCAGTAGCAGGAAATA

Function

NR:

description
PREDICTED: ankyrin repeat and IBR domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116885 False 329 lncRNA 0.50 2 740962 741553
TU116886 True 329 lncRNA 0.49 2 740962 741553

Neighbor

gene id symbol gene type direction distance location
LOC118937316 LOC106573240 coding upstream 14987 724791 ~ 731551 (+)
zgc:110410 LOC106594189 coding upstream 18569 714730 ~ 722393 (+)
LOC110512917 csmd3 coding upstream 68768 149182 ~ 672194 (+)
LOC118936272 LOC106596174 coding upstream 722866 13864 ~ 18096 (+)
cmc1 cc068 coding downstream 118906 860459 ~ 872515 (+)
LOC110506977 LOC106595099 coding downstream 164023 905576 ~ 908576 (+)
LOC118936923 NA coding downstream 227063 968616 ~ 969528 (+)
rbms3 rbms3 coding downstream 281908 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding downstream 480577 1222130 ~ 1224904 (+)
G104102 NA non-coding upstream 38611 699871 ~ 702351 (+)
G104091 NA non-coding upstream 51056 689586 ~ 689906 (+)
G103840 NA non-coding upstream 64587 676014 ~ 676375 (+)
G104072 NA non-coding upstream 97468 640776 ~ 643494 (+)
G104111 NA non-coding downstream 4843 746396 ~ 748276 (+)
G104114 NA non-coding downstream 12146 753699 ~ 754328 (+)
G104116 NA non-coding downstream 15233 756786 ~ 757771 (+)
G104128 NA non-coding downstream 36636 778189 ~ 779730 (+)
G104138 NA non-coding downstream 136506 878059 ~ 878664 (+)
G104092 NA other upstream 39691 690046 ~ 701271 (+)
G103851 NA other upstream 559940 174996 ~ 181022 (+)
G104761 NA other downstream 411508 1153061 ~ 1153749 (+)
tgfbr2b LOC106606173 other downstream 567725 1309202 ~ 1390936 (+)
G105036 NA other downstream 957520 1699073 ~ 1700431 (+)
G105042 NA other downstream 967416 1708969 ~ 1710557 (+)

Expression


Co-expression Network