G104138


Basic Information

Item Value
gene id G104138
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 878059 ~ 878664 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU116941
ACTTCCATTGACTTCAAAGCGGAATAGCTGAACCATAATCTTTGGGAAAAAAGTGAGTAATTTGGAAATAAAGATTCCTTTTGACGTGAAGATACCAGGTGTGGTGTGGATTTGGCCTGTAAGCCCACCAGAACTTGGTACCAGGTTAGGTGTGGATTTGGCCTGTCAGCCCACCAGAACTTGGTACCAGGTTAGGTGTGGATTTGGCCTGTCAGCCCACCAGAACTTGGTACCAGGTATTGTGTGGATTTGGCCCGTAAGCCCACCAGAACTTGTCGGGAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116941 True 284 lncRNA 0.44 3 878059 878664

Neighbor

gene id symbol gene type direction distance location
cmc1 cc068 coding upstream 5545 860459 ~ 872515 (+)
LOC118937316 LOC106573240 coding upstream 152084 724791 ~ 731551 (+)
zgc:110410 LOC106594189 coding upstream 155666 714730 ~ 722393 (+)
LOC110512917 csmd3 coding upstream 205865 149182 ~ 672194 (+)
LOC118936272 LOC106596174 coding upstream 859963 13864 ~ 18096 (+)
LOC110506977 LOC106595099 coding downstream 26912 905576 ~ 908576 (+)
LOC118936923 NA coding downstream 89952 968616 ~ 969528 (+)
rbms3 rbms3 coding downstream 144797 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding downstream 343466 1222130 ~ 1224904 (+)
tgfbr2b LOC106606173 coding downstream 430538 1309202 ~ 1390936 (+)
G104128 NA non-coding upstream 98329 778189 ~ 779730 (+)
G104116 NA non-coding upstream 120288 756786 ~ 757771 (+)
G104114 NA non-coding upstream 123731 753699 ~ 754328 (+)
G104111 NA non-coding upstream 129783 746396 ~ 748276 (+)
G104106 NA non-coding upstream 136506 740962 ~ 741553 (+)
G104179 NA non-coding downstream 8298 886962 ~ 897406 (+)
G104181 NA non-coding downstream 30394 909058 ~ 911619 (+)
G104183 NA non-coding downstream 33129 911793 ~ 912016 (+)
G104184 NA non-coding downstream 33929 912593 ~ 912844 (+)
G104185 NA non-coding downstream 35519 914183 ~ 914388 (+)
G104092 NA other upstream 176788 690046 ~ 701271 (+)
G103851 NA other upstream 697037 174996 ~ 181022 (+)
G104761 NA other downstream 274397 1153061 ~ 1153749 (+)
G105036 NA other downstream 820409 1699073 ~ 1700431 (+)
G105042 NA other downstream 830305 1708969 ~ 1710557 (+)
G106019 NA other downstream 1642052 2520716 ~ 2527972 (+)

Expression


Co-expression Network