G104857



Basic Information


Item Value
gene id G104857
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1158979 ~ 1159494 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU117999
GTTCATATGTTTTCCatcagggcaaatcaagtctgacattttaaagtggaaagaacaaacttcagaagccttttaggTTCTTTTTTTAAAACCTTGAATTCACTAGAAAATgtcctgcaacaacaggatgatcaaattaagataagGCATtcatagcacctttttttcatcAGAGTGCGGTGGATGGCTTTATAGAAGTCTGGTCAGAAgcagtgtattatgacatcatcaGAGTGCGGTGGATGGCTTTATAGAAGTCTGGTCAGAAgcagtgtattatgacatcatcaGAGTGCGGTGGATGGCTTTATAGAAGTCTGGTCAGAAgcagtgtattatgacatcatcaGAGTGCGGTGGATGATGGCTTTATAGAAGTCTGGTCAGAAgcagtgtattatgacatcatcaGAGTGCGGTGGATGGCTTTATAGAAGTCTGGTCAGAAGCAGTGTATTAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU117999 True 460 lncRNA 0.41 2 1158979 1159494

Neighbor


gene id symbol gene type direction distance location
azi2 azi2 coding downstream 253561 879818 ~ 905418 (-)
eomesb eomesb coding downstream 345789 806150 ~ 813190 (-)
LOC110516483 LOC106573240 coding downstream 368108 727654 ~ 790871 (-)
LOC118937315 NA coding downstream 482467 672497 ~ 676512 (-)
LOC118937314 NA coding downstream 650910 423319 ~ 508560 (-)
LOC118937319 NA coding upstream 156170 1314565 ~ 1316245 (-)
LOC110515934 gadl1 coding upstream 267757 1427251 ~ 1457133 (-)
LOC110515405 LOC106590999 coding upstream 413908 1573402 ~ 1683489 (-)
kiaa1143 k1143 coding upstream 543457 1702951 ~ 1704863 (-)
zdhhc3a zdhhc3 coding upstream 550022 1709516 ~ 1732333 (-)
G104842 NA non-coding downstream 32322 1118703 ~ 1126657 (-)
G104838 NA non-coding downstream 47692 1110028 ~ 1111287 (-)
G104827 NA non-coding downstream 85102 1072864 ~ 1073877 (-)
G104825 NA non-coding downstream 88049 1070316 ~ 1070930 (-)
G104823 NA non-coding downstream 91772 1066563 ~ 1067207 (-)
G104863 NA non-coding upstream 13840 1173334 ~ 1174778 (-)
G104870 NA non-coding upstream 49192 1208686 ~ 1210405 (-)
G104871 NA non-coding upstream 51542 1211036 ~ 1212353 (-)
G104872 NA non-coding upstream 57457 1216951 ~ 1217640 (-)
G104877 NA non-coding upstream 70260 1229754 ~ 1230759 (-)
G105220 NA other upstream 174492 1333986 ~ 1342335 (-)
G105285 NA other upstream 381236 1540730 ~ 1541706 (-)
G105340 NA other upstream 481773 1641267 ~ 1641732 (-)
G105427 NA other upstream 753098 1912592 ~ 1917188 (-)

Expression



Co-expression Network