G104992


Basic Information

Item Value
gene id G104992
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1492302 ~ 1493023 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118196
CATTTACAGTATGAGAGACatgtagaacacatttacagtatgagagacatgtagaacacatttacagtattagagacatgtagaacacatttacagtattagagacatgtagaacacatttacagtatgagagacatgtagaacacatttacagtattagAGACatgtagatcacatttacagtattagagacatgtagaacacatttacagtatgagagacatgtagaacacatttacagtattagAGACTtgtagaacacatttacagtatgagagacatgtagaacacatttaca

Function

NR:

description
PREDICTED: repetitive proline-rich cell wall protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118196 True 298 lncRNA 0.45 2 1492302 1493023

Neighbor

gene id symbol gene type direction distance location
LOC118937323 NA coding upstream 66025 1424316 ~ 1426453 (+)
tgfbr2b LOC106606173 coding upstream 101366 1309202 ~ 1390936 (+)
rbms3 rbms3 coding upstream 260767 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding upstream 267398 1222130 ~ 1224904 (+)
LOC118936923 NA coding upstream 522774 968616 ~ 969528 (+)
LOC118937324 NA coding downstream 77287 1570310 ~ 1573421 (+)
LOC118937327 NA coding downstream 95159 1585657 ~ 1588650 (+)
LOC118937328 NA coding downstream 95797 1588820 ~ 1589368 (+)
LOC118937325 NA coding downstream 112117 1605140 ~ 1606773 (+)
gpd1l LOC105023484 coding downstream 190538 1683561 ~ 1698369 (+)
G104989 NA non-coding upstream 7683 1483937 ~ 1484619 (+)
G104986 NA non-coding upstream 12640 1476560 ~ 1479662 (+)
G104981 NA non-coding upstream 28965 1460537 ~ 1463337 (+)
G104979 NA non-coding upstream 32974 1458688 ~ 1459328 (+)
G104963 NA non-coding upstream 39469 1452188 ~ 1452833 (+)
G104997 NA non-coding downstream 19269 1512292 ~ 1514245 (+)
G104999 NA non-coding downstream 21510 1514533 ~ 1515041 (+)
G105001 NA non-coding downstream 45954 1538977 ~ 1540210 (+)
G105014 NA non-coding downstream 96572 1589595 ~ 1591453 (+)
G104761 NA other upstream 338553 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 619787 860459 ~ 872515 (+)
G104092 NA other upstream 791031 690046 ~ 701271 (+)
G103851 NA other upstream 1311280 174996 ~ 181022 (+)
G105036 NA other downstream 206050 1699073 ~ 1700431 (+)
G105042 NA other downstream 215946 1708969 ~ 1710557 (+)
G106019 NA other downstream 1027693 2520716 ~ 2527972 (+)
G106122 NA other downstream 1224938 2717961 ~ 2718525 (+)
G106240 NA other downstream 1481800 2974823 ~ 3039475 (+)

Expression


Co-expression Network