G105052


Basic Information

Item Value
gene id G105052
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1640822 ~ 1641037 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118300
CTGACATTGTGTTGCAGCATGTGGAGACACTCCCCCAGACAGGAGAGGGTAGCTGCTGACGTGGCCTTGAGGAGGAGAAGGTCCTGGTCTAAGGAGGACAGAGGACCACGGGAGGGCAGGGACTCTATGGAGTTAACCAGGTTCTTCTGTTGGCCCTCCGCCTGGGTCATcacctagagggagggaggagagaggttaaataacacacacacacac

Function

NR:

description
PREDICTED: oxysterol-binding protein-related protein 10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118300 True 216 lncRNA 0.46 1 1640822 1641037

Neighbor

gene id symbol gene type direction distance location
LOC118937325 NA coding upstream 34049 1605140 ~ 1606773 (+)
LOC118937328 NA coding upstream 51454 1588820 ~ 1589368 (+)
LOC118937327 NA coding upstream 52172 1585657 ~ 1588650 (+)
LOC118937324 NA coding upstream 67401 1570310 ~ 1573421 (+)
stt3b stt3b coding upstream 76517 1456336 ~ 1564305 (+)
gpd1l LOC105023484 coding downstream 42524 1683561 ~ 1698369 (+)
tmem42a LOC106595323 coding downstream 63852 1704889 ~ 1707675 (+)
LOC110514512 LOC105016610 coding downstream 104261 1745298 ~ 1794938 (+)
slc6a3 slc6a3 coding downstream 175771 1816808 ~ 1853570 (+)
LOC110511503 LOC106605726 coding downstream 224328 1865365 ~ 1901456 (+)
G105049 NA non-coding upstream 6405 1633737 ~ 1634417 (+)
G105020 NA non-coding upstream 41281 1598185 ~ 1599541 (+)
G105019 NA non-coding upstream 42835 1597586 ~ 1597987 (+)
G105014 NA non-coding upstream 49369 1589595 ~ 1591453 (+)
G105058 NA non-coding downstream 7920 1648957 ~ 1649297 (+)
G105060 NA non-coding downstream 8570 1649607 ~ 1650827 (+)
G105063 NA non-coding downstream 20551 1661588 ~ 1662075 (+)
G105064 NA non-coding downstream 21268 1662305 ~ 1662525 (+)
G105065 NA non-coding downstream 21516 1662553 ~ 1663100 (+)
tgfbr2b LOC106606173 other upstream 287959 1309202 ~ 1390936 (+)
G104761 NA other upstream 487073 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 768307 860459 ~ 872515 (+)
G104092 NA other upstream 939551 690046 ~ 701271 (+)
G103851 NA other upstream 1459800 174996 ~ 181022 (+)
G105036 NA other downstream 58036 1699073 ~ 1700431 (+)
G105042 NA other downstream 67932 1708969 ~ 1710557 (+)
G106019 NA other downstream 879679 2520716 ~ 2527972 (+)
G106122 NA other downstream 1076924 2717961 ~ 2718525 (+)
G106240 NA other downstream 1333786 2974823 ~ 3039475 (+)

Expression


Co-expression Network