G105078


Basic Information

Item Value
gene id G105078
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1679058 ~ 1679487 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118330
TGTTGCAACACTTGTTGTGATTTCTGTCCCACTTCCCAGAAGAGCTCAGGTACTGTGATGTACTGTTCCACTTCCTAGAAGAGCTCAGGTACTGTGATGTACTGTTCCACTTCCCAGAAGAGCTCAGGTACTGTGATCTACTTCTGTCCCACTTCCCAGAAGAGCTCAGgTACTGTGATCTACTTCTGTCCCACTTCCCAGAAGAGCTCAGGTACTGTGATCTACTTCTGTCCCACTTCCCAGAAGAGCTCAGGTACTGTGATCTACTTCTGTTCCAGTTCCTAGAAGAGCTCAGGTAGTGTGATCTACTTCTGTTCCGGTTCCCAGAAGAGCTCAGGTAGTGTGATCT

Function

NR:

description
PREDICTED: tyrosine-protein kinase Tec-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118330 True 349 lncRNA 0.43 2 1679058 1679487

Neighbor

gene id symbol gene type direction distance location
LOC118937325 NA coding upstream 72285 1605140 ~ 1606773 (+)
LOC118937328 NA coding upstream 89690 1588820 ~ 1589368 (+)
LOC118937327 NA coding upstream 90408 1585657 ~ 1588650 (+)
LOC118937324 NA coding upstream 105637 1570310 ~ 1573421 (+)
stt3b stt3b coding upstream 114753 1456336 ~ 1564305 (+)
gpd1l LOC105023484 coding downstream 4074 1683561 ~ 1698369 (+)
tmem42a LOC106595323 coding downstream 25402 1704889 ~ 1707675 (+)
LOC110514512 LOC105016610 coding downstream 65811 1745298 ~ 1794938 (+)
slc6a3 slc6a3 coding downstream 137321 1816808 ~ 1853570 (+)
LOC110511503 LOC106605726 coding downstream 185878 1865365 ~ 1901456 (+)
G105074 NA non-coding upstream 5265 1673026 ~ 1673793 (+)
G105069 NA non-coding upstream 12549 1666029 ~ 1666509 (+)
G105068 NA non-coding upstream 13635 1665138 ~ 1665423 (+)
G105065 NA non-coding upstream 15958 1662553 ~ 1663100 (+)
G105064 NA non-coding upstream 16533 1662305 ~ 1662525 (+)
G105083 NA non-coding downstream 16456 1695943 ~ 1696425 (+)
G105030 k1143 non-coding downstream 23468 1702955 ~ 1704846 (+)
G105091 NA non-coding downstream 42508 1721995 ~ 1722691 (+)
G105107 NA non-coding downstream 76894 1756381 ~ 1757197 (+)
G105111 NA non-coding downstream 87322 1766809 ~ 1771032 (+)
tgfbr2b LOC106606173 other upstream 326195 1309202 ~ 1390936 (+)
G104761 NA other upstream 525309 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 806543 860459 ~ 872515 (+)
G104092 NA other upstream 977787 690046 ~ 701271 (+)
G103851 NA other upstream 1498036 174996 ~ 181022 (+)
G105036 NA other downstream 19586 1699073 ~ 1700431 (+)
G105042 NA other downstream 29482 1708969 ~ 1710557 (+)
G106019 NA other downstream 841229 2520716 ~ 2527972 (+)
G106122 NA other downstream 1038474 2717961 ~ 2718525 (+)
G106240 NA other downstream 1295336 2974823 ~ 3039475 (+)

Expression


Co-expression Network