G105036


Basic Information

Item Value
gene id G105036
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1699073 ~ 1700431 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118276
AATTAACTTTGTGAGAAGTAATTCGTTTCAGTGGCACATTTCAAAATCGTTAATTAGAGTAGAATGGAATTACTCCATTTTTCCCCAGAGGGAACTTCTGTCATTTTATACTGTTTGACTGCCATTCAcatcattttaatgacattactTTACAGTCAATCCCAATGGAGTCATACATTGTTTTTTACAAAGGGAACAAGTGCATTCTGGGAAAAAAAATCAAACGCAGTCCTTTACCTCACTAATGTAAATCCCCAATCATTATCAGTGgtaattttagcatgtaaatcttggaggggcaaaaatatttatattttttgagatgcatgccagcaaacccacaacacaacactaaacaatacattaactgcactataacggtgacaaatgtTGTCCACAaactgttgggacagctttatgtaggccctaacagcagagtcccaacagcagcccccacatcttaccactgctacacctggctatcagtggagtcccaacagcagtccccacatcttaccactgctacacctggctatcagcggagtcctaacagcagagtcccaacagcagagcccccacaacttaccactgctacacctggctatctgTGGAGttccaacagcagagtcccaacagcagtccccacatcttaccactgctacacctggctatcagcggagtcctaacagcagagtcccaacagcagagtccccacatcttaccactgctacacctggctatcagtggagtcccaacagcagagtcccaacatcttaccactgctacacctggctatcagtggagtcccaacagcagagtccccacatcttaccactgctacacctggctatcagtggagtcccaacagcagagtccccacatcttaccactgctacacctggctatcagtggagtcccaacagcagagtcccaacatcttaccactgctacacctggctatcagtggagccttgtctggcagctaAACAGTTCATTCAGACTCATTTACTGCTGATacggctgacttgcttaaactaatgtggtttctactgacaagtGAGATGTACAAACtctggcataaggggacgacaagcggataagaggccatCCGTCATTTCGTTTAAgacaatgagcgagctaggatggacggACGTTAGTCAATAATAActatttgcaatttc

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU118276 True 1181 TUCP 0.33 2 1699073 1700431

Neighbor

gene id symbol gene type direction distance location
gpd1l LOC105023484 coding upstream 704 1683561 ~ 1698369 (+)
LOC118937325 NA coding upstream 92300 1605140 ~ 1606773 (+)
LOC118937328 NA coding upstream 109705 1588820 ~ 1589368 (+)
LOC118937327 NA coding upstream 110423 1585657 ~ 1588650 (+)
LOC118937324 NA coding upstream 125652 1570310 ~ 1573421 (+)
tmem42a LOC106595323 coding downstream 4458 1704889 ~ 1707675 (+)
LOC110514512 LOC105016610 coding downstream 44867 1745298 ~ 1794938 (+)
slc6a3 slc6a3 coding downstream 116377 1816808 ~ 1853570 (+)
LOC110511503 LOC106605726 coding downstream 164934 1865365 ~ 1901456 (+)
LOC110516539 NA coding downstream 416122 2116553 ~ 2120455 (+)
G105083 NA non-coding upstream 2648 1695943 ~ 1696425 (+)
G105078 NA non-coding upstream 19586 1679058 ~ 1679487 (+)
G105074 NA non-coding upstream 25280 1673026 ~ 1673793 (+)
G105069 NA non-coding upstream 32564 1666029 ~ 1666509 (+)
G105068 NA non-coding upstream 33650 1665138 ~ 1665423 (+)
G105030 k1143 non-coding downstream 2524 1702955 ~ 1704846 (+)
G105091 NA non-coding downstream 21564 1721995 ~ 1722691 (+)
G105107 NA non-coding downstream 55950 1756381 ~ 1757197 (+)
G105111 NA non-coding downstream 66378 1766809 ~ 1771032 (+)
G105043 NA non-coding downstream 98067 1798498 ~ 1799324 (+)
tgfbr2b LOC106606173 other upstream 346210 1309202 ~ 1390936 (+)
G104761 NA other upstream 545324 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 826558 860459 ~ 872515 (+)
G104092 NA other upstream 997802 690046 ~ 701271 (+)
G103851 NA other upstream 1518051 174996 ~ 181022 (+)
G105042 NA other downstream 8538 1708969 ~ 1710557 (+)
G106019 NA other downstream 820285 2520716 ~ 2527972 (+)
G106122 NA other downstream 1017530 2717961 ~ 2718525 (+)
G106240 NA other downstream 1274392 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 1506366 3006312 ~ 3391033 (+)

Expression


Co-expression Network