G105111


Basic Information

Item Value
gene id G105111
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1766809 ~ 1771032 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118374
TGATCTTGTGCCACTAGGCCTGTACTGTAGAAGTCCTCTAACCTGTGATCTTGTGTCACTAGGCCTGTACTGTTGAAGTCCTCTAACCTGTGATCTTGCGTCACACAGAAGATCATTACTTATTATATTTAAGTACAGTTCTGACTGTGTTTTACCTTTGCTGATATTCATAGAGACCTACGAGGGGAAAACCTTTCACTGCAGCGTTGTTGGCTGAGTGTCAGGCCGGAATCTAATAACCTCCTCAACATCTTGTTAGGGTAACCAGGCGTAGCACAGGGAGTGGATTTGGACATTCATTGTGTTCAGCATCAGCAAGCCTACTCTGTAATAGAATCATGTTGGCTGTGTAGT

Function

NR:

description
PREDICTED: inactive dual specificity phosphatase 27 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118374 True 354 lncRNA 0.44 2 1766809 1771032

Neighbor

gene id symbol gene type direction distance location
tmem42a LOC106595323 coding upstream 59134 1704889 ~ 1707675 (+)
gpd1l LOC105023484 coding upstream 68440 1683561 ~ 1698369 (+)
LOC118937325 NA coding upstream 160036 1605140 ~ 1606773 (+)
LOC118937328 NA coding upstream 177441 1588820 ~ 1589368 (+)
LOC118937327 NA coding upstream 178159 1585657 ~ 1588650 (+)
slc6a3 slc6a3 coding downstream 45776 1816808 ~ 1853570 (+)
LOC110511503 LOC106605726 coding downstream 94333 1865365 ~ 1901456 (+)
LOC110516539 NA coding downstream 345521 2116553 ~ 2120455 (+)
LOC118944029 NA coding downstream 395089 2166121 ~ 2177996 (+)
LOC118944030 NA coding downstream 647154 2418186 ~ 2420621 (+)
G105107 NA non-coding upstream 9612 1756381 ~ 1757197 (+)
G105091 NA non-coding upstream 44118 1721995 ~ 1722691 (+)
G105030 k1143 non-coding upstream 61963 1702955 ~ 1704846 (+)
G105083 NA non-coding upstream 70384 1695943 ~ 1696425 (+)
G105078 NA non-coding upstream 87322 1679058 ~ 1679487 (+)
G105043 NA non-coding downstream 27466 1798498 ~ 1799324 (+)
G105039 NA non-coding downstream 28641 1799673 ~ 1799993 (+)
G105041 NA non-coding downstream 34664 1805696 ~ 1806063 (+)
G105033 NA non-coding downstream 35871 1806903 ~ 1807667 (+)
G105115 NA non-coding downstream 39044 1810076 ~ 1810305 (+)
G105042 NA other upstream 56252 1708969 ~ 1710557 (+)
G105036 NA other upstream 66378 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 413946 1309202 ~ 1390936 (+)
G104761 NA other upstream 613060 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 894294 860459 ~ 872515 (+)
G106019 NA other downstream 749684 2520716 ~ 2527972 (+)
G106122 NA other downstream 946929 2717961 ~ 2718525 (+)
G106240 NA other downstream 1203791 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 1435765 3006312 ~ 3391033 (+)
mboat1 LOC106573215 other downstream 1596173 3350582 ~ 3487129 (+)

Expression


Co-expression Network