G106229


Basic Information

Item Value
gene id G106229
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2947549 ~ 2949704 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120004
TATGTCTCCATtagggttatagaggtagtatagtatatatgtctccattagggttatagaggtagtatagtctatatgtctccattagggttatagaggtagtatagtctatatgtctccattagggttatagaggtagtatagtctatatgtctccattagggttatagaggtagtatagtctatatgtctccattagggttatagaggtagtatagtCTATAGCTGTATGTCTCCATtagggttatagaggtagtatagtCTGTATGTCTCCATTAGGATTATAGAGGTAGTGTAGTCTACAGCTGTATGTCTCCATtagggttatagaggtagtatagtctatatgtctccattagggttatagaggtagtatagtctatatgtctccattagggttataga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120004 True 405 lncRNA 0.36 2 2947549 2949704

Neighbor

gene id symbol gene type direction distance location
LOC118944030 NA coding upstream 526928 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 769553 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 827094 2116553 ~ 2120455 (+)
LOC110511503 LOC106605726 coding upstream 1046101 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 1093979 1816808 ~ 1853570 (+)
LOC118937340 NA coding downstream 28532 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 29082 2978786 ~ 2980193 (+)
mboat1 LOC106573215 coding downstream 457483 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 1101079 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 1116288 4065992 ~ 4085680 (+)
G106224 NA non-coding upstream 5996 2941146 ~ 2941553 (+)
G106194 NA non-coding upstream 74631 2872322 ~ 2872918 (+)
G106170 NA non-coding upstream 134960 2811831 ~ 2812589 (+)
G106164 NA non-coding upstream 161586 2785613 ~ 2785963 (+)
G106152 NA non-coding upstream 174935 2771726 ~ 2772614 (+)
G106238 NA non-coding downstream 20630 2970334 ~ 2971579 (+)
G106243 NA non-coding downstream 29692 2979396 ~ 2980334 (+)
G106247 NA non-coding downstream 38443 2988147 ~ 2989181 (+)
G106252 NA non-coding downstream 55360 3005064 ~ 3005325 (+)
G106253 cdkal non-coding downstream 56608 3006312 ~ 3391033 (+)
G106122 NA other upstream 229024 2717961 ~ 2718525 (+)
G106019 NA other upstream 419577 2520716 ~ 2527972 (+)
G105042 NA other upstream 1236992 1708969 ~ 1710557 (+)
G105036 NA other upstream 1247118 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 1594686 1309202 ~ 1390936 (+)
G106240 NA other downstream 25119 2974823 ~ 3039475 (+)
G106575 NA other downstream 689730 3639434 ~ 3800352 (+)
G106595 NA other downstream 726561 3676265 ~ 3677850 (+)

Expression


Co-expression Network