G106468


Basic Information

Item Value
gene id G106468
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3525123 ~ 3526728 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120419
GAAATAAAGTACTGCACCATTAACAACGAAAGGTTTATACACAACGTACAATGTCCCCAAAAGGATGTGGGGACACAATGACCAGGATAATGTTtacgtcccaaacagcaccctaatAGGGCGCCACTTGGAATGCCACGCAGAATGATAACATCATATGCAGAAAGCATCTGCTAGATGGGATGGGAGAACAGTTCACCGTtttagaatcaaatcaaatcaaatgtatttataaagcccttcttacatcagatgatgtcacaatgtgctgtacagaaacccagcctaaaaaccccccaaacagcaagcaatgcaggtgtagaagcacggagaTCTCTTAGTGATACATTGTCTCTGTCCCAAATGCCATCCTATTCCTAATACAGTGTagtacttttggccagggcccatagtagtgcactgtattgactagggtgccatttgggatgcaccctatGAATACAGGCTTCAGATGAGGGAGAGGCGGGTAGAAACCACCAACGAGCAAAACAACGACAGTCAACAGACACCAAAGGGGAAAATTATTGTTCAATAGATTTTCTGCAAACAATGTTCCATCTTGTGTTAGCATAACGGAGATTCAATATGTTACGGAAATCAGGATATGCTTTCCAAAGCACTAAAGGTTTAAATTCACAGTCATTTGAATTTCAACAGAACCTGatttaatatatatttaaaaatgctTAAGGTTATTAATCGATTCCTTTACTTCCTGAatggactgaattgaaatggcATTGATCCCCAACCCTGCTGTTCAGATTGTTCCCATCAGGTTCAAACCAACATAAACACCAGTCCTCAAGGCTCTTTACAGAATGATCATGTTGTTGGTTGTGTCCCAGTAATCTGTGTCCCAGTAATCTGTGTCCCAGTAATCTGTGTCCCAGTAATCTGTGTCCCAATAATCTGTGTCCCGGTAATCTGAAGTGGCCATTACACTACAACTCAACTGGTCTGCTAGCTTAGTTATGCCTTCTTCTTCGTGGTCGGAGGAATAAGATAGTTATGCCTtcttcttcttCGTGGTTGGAGGAATAAGATAGTTATGCCTTCTTCTTCTTCGTGGTTGGAGGAATAAACAGTGTAACTTTTACAGAGGCAAGGCTTTAATCACGCGTCTCTGATCAGAACTGTCAAGGACAGAAAACACAAAATCACAaacttaataataataaaattagAATAATAACATGACATAATCAAACGCAACCTTTATTTCTCTTCTTGTCAAAACCATCTCAACGTTGTACATCTTTCACGCTCCCCGTAATAAAGGGACCATCCCGTTCTTATACGTGGTTGTCACagcctgaccatagtttgctttgtatgttctatgttttgtttggtcagggtgtgatctgagtgggcattctatgttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120419 True 1409 lncRNA 0.41 3 3525123 3526728

Neighbor

gene id symbol gene type direction distance location
mboat1 LOC106573215 coding upstream 103024 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 544930 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 546599 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 1104502 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1347127 2166121 ~ 2177996 (+)
colec10 LOC106591867 coding downstream 524055 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 539264 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 586394 4113122 ~ 4119742 (+)
deptor deptor coding downstream 710152 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 801255 4327983 ~ 4572381 (+)
G106518 NA non-coding upstream 906 3523954 ~ 3524217 (+)
G106478 NA non-coding upstream 67260 3457279 ~ 3457863 (+)
G106461 NA non-coding upstream 77584 3416549 ~ 3447539 (+)
G106470 NA non-coding downstream 4236 3530964 ~ 3531602 (+)
G106520 NA non-coding downstream 10253 3536981 ~ 3537309 (+)
G106523 NA non-coding downstream 17751 3544479 ~ 3545128 (+)
G106522 NA non-coding downstream 17987 3544715 ~ 3549069 (+)
G106535 NA non-coding downstream 49352 3576080 ~ 3576784 (+)
G106253 cdkal other upstream 134090 3006312 ~ 3391033 (+)
G106240 NA other upstream 485648 2974823 ~ 3039475 (+)
G106122 NA other upstream 806598 2717961 ~ 2718525 (+)
G106019 NA other upstream 997151 2520716 ~ 2527972 (+)
G106575 NA other downstream 112706 3639434 ~ 3800352 (+)
G106595 NA other downstream 149537 3676265 ~ 3677850 (+)
G106775 NA other downstream 500347 4027075 ~ 4027594 (+)
G106814 NA other downstream 611085 4137813 ~ 4138496 (+)
G107922 NA other downstream 1217440 4744168 ~ 4745586 (+)

Expression


Co-expression Network