G106574


Basic Information

Item Value
gene id G106574
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3639038 ~ 3640178 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120568
atatttatccgttattttaccaggtaagttgactgagaacacgttctcatttacagcaacgacctggggaATAAATAACACTGGggttatacagtacatacagtctaTGTCCTACCACTCAGACCTGGAGGGCCTAACCTTCCTAAATACTGATAGTTGCCATGGAGACAGCTCGTACTACACTCTCTAACTGactctactactataacctagtgttacctctctgactctactactataacctagtgttacctctgactctactactataacctagtgttacctctctgactctactactataacctagtgttacctctctgactctactactataacctagtgatacctctctgactctactactataacctagtgttatctctctgactc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120568 True 393 lncRNA 0.41 2 3639038 3640178

Neighbor

gene id symbol gene type direction distance location
mboat1 LOC106573215 coding upstream 216939 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 658845 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 660514 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 1218417 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1461042 2166121 ~ 2177996 (+)
colec10 LOC106591867 coding downstream 410605 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 425814 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 472944 4113122 ~ 4119742 (+)
deptor deptor coding downstream 596702 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 687805 4327983 ~ 4572381 (+)
G106573 NA non-coding upstream 53 3636815 ~ 3638985 (+)
G106572 NA non-coding upstream 2503 3635640 ~ 3636535 (+)
G106568 NA non-coding upstream 6890 3631624 ~ 3632148 (+)
G106564 NA non-coding upstream 11396 3626526 ~ 3627642 (+)
G106555 NA non-coding upstream 29300 3609110 ~ 3609738 (+)
G106578 NA non-coding downstream 3237 3643415 ~ 3645104 (+)
G106579 NA non-coding downstream 5309 3645487 ~ 3648411 (+)
G106590 NA non-coding downstream 22639 3662817 ~ 3663360 (+)
G106595 NA non-coding downstream 36087 3676265 ~ 3677850 (+)
G106597 NA non-coding downstream 41719 3681897 ~ 3682180 (+)
G106253 cdkal other upstream 248005 3006312 ~ 3391033 (+)
G106240 NA other upstream 599563 2974823 ~ 3039475 (+)
G106122 NA other upstream 920513 2717961 ~ 2718525 (+)
G106019 NA other upstream 1111066 2520716 ~ 2527972 (+)
G106775 NA other downstream 386897 4027075 ~ 4027594 (+)
G106814 NA other downstream 497635 4137813 ~ 4138496 (+)
G107922 NA other downstream 1103990 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 1168561 4808739 ~ 4811575 (+)

Expression


Co-expression Network