G106645


Basic Information

Item Value
gene id G106645
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3776115 ~ 3776747 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120698
ACATCAGAGATATACAGGGACCAGTAGCTAGCTATTagagagaacaacaacaacacacatcagaGATATACAGGGACCAGTAGCTAGCTATTagagagaacaacaacaacacacatcagaGATATACAGGGACCAGTAGCTAGCTATTAGAGAGAACAACACACATCAGAGACATACAGGGACCAGTAGCTAGCTATTagagagaacaacaacaacacacatcagaTATATACAGGGACCAGTAGCTAGCTATTAGAGAGaacaacaacacacatcagaTATATACAGGGACCAGTAGCTAGCTATTAGAGGGAACAACACACATCAGAGACATACAGGTGCCAGTAGCTAGCTATTAGAgagaacaacaacacacagagatatacagggaCCAGTAGCTAGCTATTAGAGGGAACAATCCTCTGGCTAGATCATCCACATACAATTAGACAAGAGTatttatcccaaatggcaccctat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120698 True 480 lncRNA 0.42 2 3776115 3776747

Neighbor

gene id symbol gene type direction distance location
mboat1 LOC106573215 coding upstream 354016 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 795922 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 797591 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 1355494 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1598119 2166121 ~ 2177996 (+)
colec10 LOC106591867 coding downstream 274036 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 289245 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 336375 4113122 ~ 4119742 (+)
deptor deptor coding downstream 460133 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 551236 4327983 ~ 4572381 (+)
G106642 NA non-coding upstream 11668 3763887 ~ 3764447 (+)
G106630 NA non-coding upstream 34102 3741589 ~ 3742013 (+)
G106625 NA non-coding upstream 47233 3726817 ~ 3728882 (+)
G106617 NA non-coding upstream 54774 3717002 ~ 3721341 (+)
G106616 NA non-coding upstream 60279 3715211 ~ 3715836 (+)
G106647 NA non-coding downstream 2943 3779690 ~ 3781177 (+)
G106649 NA non-coding downstream 19479 3796226 ~ 3798842 (+)
G106654 NA non-coding downstream 29877 3806624 ~ 3808552 (+)
G106656 NA non-coding downstream 35780 3812527 ~ 3816515 (+)
G106659 NA non-coding downstream 43042 3819789 ~ 3822277 (+)
G106595 NA other upstream 98265 3676265 ~ 3677850 (+)
G106253 cdkal other upstream 385082 3006312 ~ 3391033 (+)
G106240 NA other upstream 736640 2974823 ~ 3039475 (+)
G106122 NA other upstream 1057590 2717961 ~ 2718525 (+)
G106775 NA other downstream 250328 4027075 ~ 4027594 (+)
G106814 NA other downstream 361066 4137813 ~ 4138496 (+)
G107922 NA other downstream 967421 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 1031992 4808739 ~ 4811575 (+)
G108048 NA other downstream 1081164 4857911 ~ 4858274 (+)

Expression


Co-expression Network