G106654


Basic Information

Item Value
gene id G106654
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3806624 ~ 3808552 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120710
atgctgtctataggtaacaggtaaTACTGTCTGGATAAATGATGGTCTGatgctgtctataggtaacaggtaaTACTGTCTGGATAAATGATGGCCTGatgctgtctataggtaacaggtaaTACTGTCTGAATAAATGATGgtctataggtaacaggtaaTACTGTCTGGATGGATGAATGATGGCCTGatgctgtctataggtaacaggtgATACTGTCTGGTTAAATGATGGTCTGatgctgtctataggtaacaggtcaAACTGTCTGGTTAAATGATGGCCTGatgctgtctataggtaacaggtaaTACTGTCTGGTTAAATGATGGCCTATAGGTAACAGGTAATACTGTCTGGTTAAATGATGgtctataggtaacaggtaaTACTGTCTGGATGGTTAAATGATGGTCTGatgctgtctataggtaacaggtgATACTGTCTGGTTAAATGATGGCCTGatgctgtctataggtaacaggtaaTACTGTCTGGTTAAATTATGGCCTATAGGTAACAGGTAATACTGTCTGGTTAAATGATGgtctataggtaacaggtaaTACTGTCTGGATGGTTAAATGATGGTCTGatgctgtctataggtaacaggtgATACTGTCTGAATAAATGATGgtctataggtaacaggtaaTACTGTCTGGATGAATGATGGTCTGatgctgtctataggtaacaggtaaTACTGTCTGGATAAAT

Function

NR:

description
PREDICTED: histone-lysine N-methyltransferase SUV420H1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120710 True 727 lncRNA 0.56 3 3806624 3808552

Neighbor

gene id symbol gene type direction distance location
mboat1 LOC106573215 coding upstream 384525 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 826431 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 828100 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 1386003 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1628628 2166121 ~ 2177996 (+)
colec10 LOC106591867 coding downstream 242231 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 257440 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 304570 4113122 ~ 4119742 (+)
deptor deptor coding downstream 428328 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 519431 4327983 ~ 4572381 (+)
G106649 NA non-coding upstream 7782 3796226 ~ 3798842 (+)
G106647 NA non-coding upstream 25447 3779690 ~ 3781177 (+)
G106645 NA non-coding upstream 29877 3776115 ~ 3776747 (+)
G106642 NA non-coding upstream 42177 3763887 ~ 3764447 (+)
G106630 NA non-coding upstream 64611 3741589 ~ 3742013 (+)
G106656 NA non-coding downstream 3975 3812527 ~ 3816515 (+)
G106659 NA non-coding downstream 11237 3819789 ~ 3822277 (+)
G106664 NA non-coding downstream 24278 3832830 ~ 3833410 (+)
G106671 NA non-coding downstream 31537 3840089 ~ 3840777 (+)
G106672 NA non-coding downstream 34340 3842892 ~ 3843577 (+)
G106575 NA other upstream 6272 3639434 ~ 3800352 (+)
G106595 NA other upstream 128774 3676265 ~ 3677850 (+)
G106253 cdkal other upstream 415591 3006312 ~ 3391033 (+)
G106240 NA other upstream 767149 2974823 ~ 3039475 (+)
G106775 NA other downstream 218523 4027075 ~ 4027594 (+)
G106814 NA other downstream 329261 4137813 ~ 4138496 (+)
G107922 NA other downstream 935616 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 1000187 4808739 ~ 4811575 (+)
G108048 NA other downstream 1049359 4857911 ~ 4858274 (+)

Expression


Co-expression Network