G106656


Basic Information

Item Value
gene id G106656
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3812527 ~ 3816515 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120719
CTGCAGTAACAGTGCTGTTCCATtagactccctccctctgcagtaacagtgctgttccattagactccctccctctgcagtaacagtgctgttccaagagactccctccctctgcagtaacagtgctgttccattagactccctccctctgcagtaacagtgctgttccattagactccctccctctgcagtaacagtgctgttccaagagactccctccctctgcagtaacAGTGCTTTTCCATtagactccctccctctgcagtaacagtgctgttccaggagactccctccctctgcagtaacAGTGCTGTTCCTTTAgactccctccctctgcagtaacAGTGTCATTAATTAGGGCTATATTACTAACAACATGCTGGTTGGTGTGAACAGTTTAATCAGAGGTGTGAACAGAGGAACACTGAGTAATTGCTCTCCTATGATGATGCTCCactaagcaataaggcacgagggggtgtgtcctatataccacggctaagggctgttcttaaagcacgacgcaacacggagtgcctggatacagtccttatccgtggtatattgaccatacaccacaaacccctgaggtgccttattgctgttataaactggttaccaacgtatttagagcagtaaaaataaatgttttattgtacCTGTGGTATACAGCAGCCCTGTGGATGTTAAACATCAGAGAACTGTCTGTGGATGTTAAACATCAGAGAACTGTCTGTGGATGTTAAACATCAGAGAGCAGCCCTGTGGATGTTAAACATCAGAGAGCTGTCTGTGGATGTTAAACATCAGAGAGCAGCCCTGTGGATGTTAAACATTAGAGAACTGTCTGTGGATGTTAAACATCAGAGAACTGTCTGTGGATGTTAAACATTAGAGAACTGTCTGTGGATGTTAAACATCAGAGAACGGCCTGTGGATGTTAAACATTAGAGAACTGTGGTTCTGTGGTTCATGGTAAGGAAGTTGAATACAAGTTTTCCATGCAAGTGtcagaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120719 True 1016 lncRNA 0.45 3 3812527 3816515

Neighbor

gene id symbol gene type direction distance location
mboat1 LOC106573215 coding upstream 390428 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 832334 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 834003 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 1391906 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1634531 2166121 ~ 2177996 (+)
colec10 LOC106591867 coding downstream 234268 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 249477 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 296607 4113122 ~ 4119742 (+)
deptor deptor coding downstream 420365 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 511468 4327983 ~ 4572381 (+)
G106602 NA non-coding upstream 101 3694731 ~ 3812426 (+)
G106654 NA non-coding upstream 3975 3806624 ~ 3808552 (+)
G106649 NA non-coding upstream 13685 3796226 ~ 3798842 (+)
G106647 NA non-coding upstream 31350 3779690 ~ 3781177 (+)
G106645 NA non-coding upstream 35780 3776115 ~ 3776747 (+)
G106659 NA non-coding downstream 3274 3819789 ~ 3822277 (+)
G106664 NA non-coding downstream 16315 3832830 ~ 3833410 (+)
G106671 NA non-coding downstream 23574 3840089 ~ 3840777 (+)
G106672 NA non-coding downstream 26377 3842892 ~ 3843577 (+)
G106680 NA non-coding downstream 40315 3856830 ~ 3857185 (+)
G106575 NA other upstream 12175 3639434 ~ 3800352 (+)
G106595 NA other upstream 134677 3676265 ~ 3677850 (+)
G106253 cdkal other upstream 421494 3006312 ~ 3391033 (+)
G106240 NA other upstream 773052 2974823 ~ 3039475 (+)
G106775 NA other downstream 210560 4027075 ~ 4027594 (+)
G106814 NA other downstream 321298 4137813 ~ 4138496 (+)
G107922 NA other downstream 927653 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 992224 4808739 ~ 4811575 (+)
G108048 NA other downstream 1041396 4857911 ~ 4858274 (+)

Expression


Co-expression Network