G106715


Basic Information

Item Value
gene id G106715
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3922174 ~ 3922997 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120797
ttcactgtaaggtctactatacctgttgtattcagcatttcactgtaaggtctacctacatctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactatacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactataaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120797 True 325 lncRNA 0.38 2 3922174 3922997

Neighbor

gene id symbol gene type direction distance location
mboat1 LOC106573215 coding upstream 500075 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 941981 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 943650 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 1501553 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1744178 2166121 ~ 2177996 (+)
colec10 LOC106591867 coding downstream 127786 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 142995 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 190125 4113122 ~ 4119742 (+)
deptor deptor coding downstream 313883 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 404986 4327983 ~ 4572381 (+)
G106703 NA non-coding upstream 15128 3906384 ~ 3907046 (+)
G106695 NA non-coding upstream 36767 3884803 ~ 3885407 (+)
G106680 NA non-coding upstream 64989 3856830 ~ 3857185 (+)
G106672 NA non-coding upstream 78597 3842892 ~ 3843577 (+)
G106671 NA non-coding upstream 81397 3840089 ~ 3840777 (+)
G106720 NA non-coding downstream 5791 3928788 ~ 3929887 (+)
G106710 LOC106574253 non-coding downstream 7640 3930637 ~ 3933532 (+)
G106721 NA non-coding downstream 11997 3934994 ~ 3936469 (+)
G106734 NA non-coding downstream 37276 3960273 ~ 3960791 (+)
G106743 NA non-coding downstream 44605 3967602 ~ 3968660 (+)
G106575 NA other upstream 121822 3639434 ~ 3800352 (+)
G106595 NA other upstream 244324 3676265 ~ 3677850 (+)
G106253 cdkal other upstream 531141 3006312 ~ 3391033 (+)
G106240 NA other upstream 882699 2974823 ~ 3039475 (+)
G106775 NA other downstream 104078 4027075 ~ 4027594 (+)
G106814 NA other downstream 214816 4137813 ~ 4138496 (+)
G107922 NA other downstream 821171 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 885742 4808739 ~ 4811575 (+)
G108048 NA other downstream 934914 4857911 ~ 4858274 (+)

Expression


Co-expression Network