G106849


Basic Information

Item Value
gene id G106849
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4218375 ~ 4218891 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120991
TCTGGTATCCGAAGGAGAAGACGTGTGCTCCTCTCTCAGCCATGCTCCCCTCTACGTCAGGCACCACAAAGTGAAGGCCTCCTTTAGGCTGGTCCAGAGAGAACTCTATGTACACCTTCAGCACATTCATCTCTGAAGACATAGAAACAGTCATTTATTTACAGGGCACTAAGTTCAATTGTACATAAACAATACTGTAAAGCTTCCTGATGCTATATGCATTAAGCTGAGAGCATCGCAGGACATTAGCCTGGTTCCTGGTGTGTTGGTATTATATAAACAGATCGAGGACCAACCGGGCTATCAGAATACACCTTGAACCTTTATAGTCAAACTACAGACCCAAGTCTCAAGTCCCAAGTCCCAAGTCCCAAGACTCAAGTTCCAAGACTCAAGTTCCAAGACTCAAGTTCCAAGACTCAAGTTCCAAGACTCAAGTTCCAAGACTCAAGTTCCAAGACTCAAGTT

Function

NR:

description
PREDICTED: transcription initiation factor TFIID subunit 2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120991 True 468 lncRNA 0.45 2 4218375 4218891

Neighbor

gene id symbol gene type direction distance location
LOC110507036 LOC106594376 coding upstream 98633 4113122 ~ 4119742 (+)
mal2 mal2 coding upstream 132695 4065992 ~ 4085680 (+)
colec10 LOC106591867 coding upstream 152768 4050783 ~ 4065607 (+)
mboat1 LOC106573215 coding upstream 796276 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 1238182 2978786 ~ 2980193 (+)
deptor deptor coding downstream 17989 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 109092 4327983 ~ 4572381 (+)
LOC110520696 mtbp coding downstream 384067 4602958 ~ 4654733 (+)
LOC118937359 NA coding downstream 415612 4634503 ~ 4636138 (+)
LOC118937361 NA coding downstream 516766 4735246 ~ 4737284 (+)
G106842 NA non-coding upstream 11841 4206035 ~ 4206534 (+)
G106841 NA non-coding upstream 12363 4205440 ~ 4206012 (+)
G106806 NA non-coding upstream 29342 4186818 ~ 4189033 (+)
G106831 NA non-coding upstream 50058 4167720 ~ 4168317 (+)
G106814 NA non-coding upstream 79879 4137813 ~ 4138496 (+)
G106851 NA non-coding downstream 815 4219706 ~ 4220363 (+)
G106852 NA non-coding downstream 2643 4221534 ~ 4222247 (+)
G106855 NA non-coding downstream 3567 4222458 ~ 4223131 (+)
G106857 NA non-coding downstream 5225 4224116 ~ 4224594 (+)
G106859 NA non-coding downstream 7373 4226264 ~ 4226569 (+)
G106775 NA other upstream 190781 4027075 ~ 4027594 (+)
G106575 NA other upstream 418023 3639434 ~ 3800352 (+)
G106595 NA other upstream 540525 3676265 ~ 3677850 (+)
G107922 NA other downstream 525277 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 589848 4808739 ~ 4811575 (+)
G108048 NA other downstream 639020 4857911 ~ 4858274 (+)
G108280 NA other downstream 917465 5136356 ~ 5136992 (+)
G108354 LOC106573122 other downstream 1077288 5296179 ~ 5299933 (+)

Expression


Co-expression Network